| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5104 |
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| Symbol | |
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| ID | 8450735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 5690520 |
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| End bp | 5693504 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645044139 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003204363 |
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| Protein GI | 258655207 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC CGGACTCCGC CACCGGACCG ATCGTCGACC TGCTCGGACC CGTGCGCATC
CAGGGGCCCG CCGAACCGCA GATCCTGACC CGGCGCATGG AGATCGGCGT GCTGGGCATG
CTCGCGCTGC ACGCCGGGAC CCCCGTCACC GGGTCCAACC TGATCGACCT GCTGTGGCCG
CAGGACCCGC CCCGCACGGC CGCCAAGACG CTGCAGGGGT ACGTCAAGCG CGTCCGCGGC
CTACTGGCCG GCGCCCGGGT CGAGCTGTCC TACGTCGGGC CGGCCGGGTA CCTCCTGGCC
CTGGCCCCGG AGCAGGTCGA CGCCCTCCGG TTCGAGTCGC TGGTCGCGGC CGCCCGGACC
TGCCCCGACG ACTCGCTGCG AGTCCAGCAG CTGGACGAGG CGCTGGCGCT CTGGCGCGGC
GAGCCGTTTG CCGGCTGCGA CCTGGAGGGT CTGGGCCCCT TCCGCCAGTG GCTGGAGCGG
CTGCGTAGCG GGGCCCGGTT GGAGCGGGCG ACCGCGGACA TCCGGCGCGG GGTCACGGAG
CAGACGATCA GCGCGCTGCG CGTGCTGATC GCTCAGGAAC CGACCAACGA GCGGCTGTGG
CTGCACCTGA TCGCGGCGTT GTACCTGGTC GGCAACCCGG TCGCGGCGCT GGAGGCCAGC
GCCGAGGCCC GGCGGGAACT GGACGAGCGG GTCGGGGTCG CCCCCGGACC CGAGTTGATG
GAGATCGAGC ACCGGATCGG CGTGCACGAC GACGTCGAGG GGTGTTACGT CCGGCTCACC
GGCATCGAGC TGCGGCCGGC CACGGTCACC CCGGCTCCCG CCTCGGGTTC GACCCCGGGG
TCCGGATCCG GCGCGGATCG CGAACGAGCC AATGCCGCCC TGCCGATGCC CGTCTGGGCC
GGCGAATTGG TGGACCGCGA GGACACCGTC GCCGACATCG TCCGGCAGAT CGACCGCGGC
GTGCCGGTCG TCACCATCGT CGGGCCGGGC GGGATGGGCA AGACGCGGTG CGCCGTGGAG
GCGGCCCGAC AGGCCGGCAC GGTCTGCGTG GGATTCCTGG ATCTGAGCGG CATCGTCTCC
GCCGATGCGC TGGCCGTGCA CCTGGCCGGC ACCATCGGCA CCCCCGGCCA CGACGACCCG
TTCGTCGCGA TCGCCGAGAG GCTGGCCGGG CATCGCTGCT GCGTCCTGCT CGACAACGCC
GAGCAGATCG TCGGCGGCGC CGACGTGATC GGCCGGCTGG CCAGTCTCTG CCCGTCGGTC
ACCTGGCTGG TCACCTCGCG CCTGGAGCTG GGGCTGGAGG CCGAGCGGGT CACCCGCCTG
CAGCCGCTGC CGTTGGACCC GGTCGCCGGC GGGATGAGCC TGTCGGCGGC GCTGCTGCTC
TCCGCCGCCC AGCGCCGCGG CGTCAGCCTG CCGGCCGCGG CCCATCCGGT GATCGAACAG
ATCGCCGCCG CAATCGGCGG CATCCCGCTG GCCCTGGAAC TGGCCGCCTG CCAACTGCAG
TCGCTGGACC CGGCCACCCT GCTGCGCGCG CTGGACGATC CCCTGGTCAC CCTGGTCGAC
CGGCGTCGGG CCATCGACCG GCACCGGTCC ATGCGCGCCT GCTTCCAGCT CGGCCTCGAC
CAACTCTCCC CCGACGGCCT CGTCCTGCTG GCGCTGCTGT CCGGGCGCCC CAACGGCGCC
CGCTACGACG ACCTGGCCGC CGTCTGGCCG GCCGAGTCCG CCGAGCCGCT GCCCGCGGCT
CTGGCCGAGC TGGTCGAACT CGGTTTCGCC GCCGGCGCCA CCGATACTGC CGGGGCGACC
CGGATCACCC AGCTGCCGGT CGTGCGCGCA CTGGGCCGGG AACTGACCGT CGCCGACCAA
CTCGGCCCGC TGCCCGCCGC GCTGGACGCG GTGGTGATGG GCCGGGTGGC CGCCGCATCG
GCCGGCGGCC ACACTTCCGA CGTCGAACCC GATCTGGCCG ATGTGCGCCG CCTGCTCCAG
TTCGGGGTCG ATGACGACGC CGGGCTGGAA CCGGCGCTGG GCTTGGCCGC CGCCCTGGTC
ATCTACTGGT GGTCGCATCG AATGGTCGAG GGTCGTGGTT GGCTCCACGC CCTTCTGCGC
CGCCCGGTCC GGCAACAGCC CTCGGTCAAT CGTCTGCTAG CGCTCAACTC GGCGGTGTTT
CTGGACTACG GCGTCGGCGA CAGCGATTCG GCTCGGCGGC ACGCAGATGA GGCGCTCGCC
ACCGGCGCCG CGATGGTTCC GCCGGTCCAC TCCATGCTGC TGTCCCGTAC TGCCATGCTG
GACGCCGCCG AAGAGTCGAT CGACCTGGCG CGATCGCGGG CCGCTGAGTC GTTGGCCATT
GCCCGGGCAA TCGGTGACGG GCAGGTCTTG TGGCTGACGC TGGGGAATTG TGGTGACGTT
GCCATCGCGA CCGGCGACCG GCACCAGGCT CGTGAGCTGT ATCTGGAATG CATCGATCAG
CTCCGGCGGA GCGGAATCTC CTGGTTGGCG GCCGCGCCAT GCGGGAGGCT GGGCGACCTG
GAGCTCTCCG CCGGTCGTCT CACGGAGTCT CGAATGTGGT TCGACCGAGC GGTGTCACTG
TGGCTGGATC GTGAACTCGG AGCAGGTGCC GGACAGACCC TGGCCGGAGC TGCTCGATTG
GACGTGATCG AGGGGCGGTT GGCCGATGCG CGCACTCATC TCGACGCCGG GCTGCTCGCC
GCTGAGAAGT CCGGAAGCCG AGTTGAGTAC CCGTTCCTGA CGATCGGCTA CGCAGCCCTC
GCGGCGGCTC GTGACGATGA CGACACGGCT CGAGCCCTGT TCGCCCTTGC TCTGTCTCAC
GGACGGCGGG CGGGTGTCGC GTTGCGTCCG ATGATTGATG GAGAGCTTGC GTCGCTCTAC
CGGTCAAAGG TCGACCGTTC CTCTCGTGAA AATGATGAGG CCCTGGCGCT GACGACTTCA
CTCGAGGACC TCCCGACGAT CATCCGGCGC TTGATCGGTC CGTGA
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| Protein sequence | MSEPDSATGP IVDLLGPVRI QGPAEPQILT RRMEIGVLGM LALHAGTPVT GSNLIDLLWP
QDPPRTAAKT LQGYVKRVRG LLAGARVELS YVGPAGYLLA LAPEQVDALR FESLVAAART
CPDDSLRVQQ LDEALALWRG EPFAGCDLEG LGPFRQWLER LRSGARLERA TADIRRGVTE
QTISALRVLI AQEPTNERLW LHLIAALYLV GNPVAALEAS AEARRELDER VGVAPGPELM
EIEHRIGVHD DVEGCYVRLT GIELRPATVT PAPASGSTPG SGSGADRERA NAALPMPVWA
GELVDREDTV ADIVRQIDRG VPVVTIVGPG GMGKTRCAVE AARQAGTVCV GFLDLSGIVS
ADALAVHLAG TIGTPGHDDP FVAIAERLAG HRCCVLLDNA EQIVGGADVI GRLASLCPSV
TWLVTSRLEL GLEAERVTRL QPLPLDPVAG GMSLSAALLL SAAQRRGVSL PAAAHPVIEQ
IAAAIGGIPL ALELAACQLQ SLDPATLLRA LDDPLVTLVD RRRAIDRHRS MRACFQLGLD
QLSPDGLVLL ALLSGRPNGA RYDDLAAVWP AESAEPLPAA LAELVELGFA AGATDTAGAT
RITQLPVVRA LGRELTVADQ LGPLPAALDA VVMGRVAAAS AGGHTSDVEP DLADVRRLLQ
FGVDDDAGLE PALGLAAALV IYWWSHRMVE GRGWLHALLR RPVRQQPSVN RLLALNSAVF
LDYGVGDSDS ARRHADEALA TGAAMVPPVH SMLLSRTAML DAAEESIDLA RSRAAESLAI
ARAIGDGQVL WLTLGNCGDV AIATGDRHQA RELYLECIDQ LRRSGISWLA AAPCGRLGDL
ELSAGRLTES RMWFDRAVSL WLDRELGAGA GQTLAGAARL DVIEGRLADA RTHLDAGLLA
AEKSGSRVEY PFLTIGYAAL AAARDDDDTA RALFALALSH GRRAGVALRP MIDGELASLY
RSKVDRSSRE NDEALALTTS LEDLPTIIRR LIGP
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