Gene Namu_5068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5068 
Symbol 
ID8450699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5652781 
End bp5653674 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content73% 
IMG OID645044104 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003204328 
Protein GI258655172 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCT CCATGTTCGA GGGCTTCGCG GAGTTGGACG TCCGGGTCAA CGGGGTGCGG 
TTGCGCGGCC GGGTCGGCGG GGACCCGGCC CGGCCGCCGC TGTTGCTGGT GCACGGCTTC
CCCGAGTCGC ACCTGATCTG GCACCGGATG GCGCCCTCGC TGGCCCGCGA CTTCTTCGTC
GTCGCGCCCG ACCTACGGGG CTACGGCGAT TCGGAGCGGC CGCCGGCCAC CGCCGACCAC
GCGTCCTACA GCAAGCGAGA GATGGCCCGC GACTGCGTGG CCCTGCTGGA GCATCTCGGC
CACGACCGGT TCGCGGTGGT CGGGCACGAC CGCGGCGCCC GGGTGACCGC CCGGCTGGCC
GCCGACCACC CGGACCGGGT CACCCGGGCG ATGCTGCTGG ACATCGCGCC CACCCTGGAC
ATGTACGAGG GCACGACCCG CGAGTTCGCC ACCGCCTACT GGCACTGGTT CTTCCTGATC
CGGCCGGCGC CGCTGCCGGA GGAGCTGATC GGGGCGCAGC CGCGGCTGTT CGTGGAGCAG
CTGATGGGTA GCGGATCGGC CGGCCTGGAC CCGTTCCCGC CGGAGGTGCT CGACCGGTAC
GTCGACGCGA TGACCGGGCC GGACCGGGCC TTCGGCATGT GCGAGGACTA CCGCGCGGCC
GCCACCATCG ACCTGGCGCA CGACCGGGCC GACCGCGCGG CCGGCCGGCG GATCGCCGTG
CCGCTGCGGG TGCTCTGGGG TGCGCGAGGC ATCGTGCACC GGCTGTTCGA CCCGCTGGCG
TTGTGGCGCG GCGTCGCCGA CGACGTCACC GGCCGATCGG TCGATTGCGG TCACTACCTG
CCCGAGGAGC TGCCCGACGA GATCGAGCTG GAGATCCGCA CCTTCCTGGG CTGA
 
Protein sequence
MISSMFEGFA ELDVRVNGVR LRGRVGGDPA RPPLLLVHGF PESHLIWHRM APSLARDFFV 
VAPDLRGYGD SERPPATADH ASYSKREMAR DCVALLEHLG HDRFAVVGHD RGARVTARLA
ADHPDRVTRA MLLDIAPTLD MYEGTTREFA TAYWHWFFLI RPAPLPEELI GAQPRLFVEQ
LMGSGSAGLD PFPPEVLDRY VDAMTGPDRA FGMCEDYRAA ATIDLAHDRA DRAAGRRIAV
PLRVLWGARG IVHRLFDPLA LWRGVADDVT GRSVDCGHYL PEELPDEIEL EIRTFLG