Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5052 |
Symbol | |
ID | 8450683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5636404 |
End bp | 5637189 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645044088 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003204312 |
Protein GI | 258655156 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCG ACCTCGACGG CCGCGTCGCC ATCGTCACCG GCGCGAGCAA GGGCATCGGC CTGGCGATCA CCCGGACCTT CGTCGACGAG GGGGTCCACG TCATGGCGGG CGCCCGCCGG CTCTCCGACG AGTTGGCCGG GCTGGTCGAG GCCGGCGGGG CAACCTTCGT CCCGGTCGAC CTGGCCACCG CCGACGCCGC CGACCAGCTG CTGGCGGCCG CCCTGGGCCG CGGCCGCGTG GACATCCTGG TCAACAATGT CGGCGCCGTC GGCACCCGGC TCGACGGGTT CCTGGCCGTG ACCGACGAGC AGTGGCTGAC CTCGCTGAAT CTGAACCTGA TGGCCGCCGT CCGGATGACC CGGGCGGTGC TGCCCACCAT GCTGGCCGCC GGCGGCGGCA GCATCGTGAA CACCGGCTCG GTCAACGCCT TCCTGCCCGA CCCGACCGTC ATCGACTACA GCGCCGGCAA GGCCGCGCTC ACCAACCTGA GCAAGGCACT GTCCAAGGAG TTCGGACCGC GGGGCGTGCG GGTCAACAGC GTGAGCCCGG GTCCGGTGGA GACCGACCTG TGGCTGGGCG ATGGCGGGGT GGCCGCCACC ATCGCTCAGG CCGCCGGCGG TGATCCGGCC GCCATCGCGG CGCAGGCCGC GGCCGGCAGC GTCACCGGCC GGTTCACCCG CCCGCAGGAG GTGGCCGACC TGGTTGTGTT CCTGGCCAGC GACCGGGCGG CCAACATCAC CGGGGCCGAC GTCACGATCG ACGGCGGCCT GATCACGACG ATCTGA
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Protein sequence | MNLDLDGRVA IVTGASKGIG LAITRTFVDE GVHVMAGARR LSDELAGLVE AGGATFVPVD LATADAADQL LAAALGRGRV DILVNNVGAV GTRLDGFLAV TDEQWLTSLN LNLMAAVRMT RAVLPTMLAA GGGSIVNTGS VNAFLPDPTV IDYSAGKAAL TNLSKALSKE FGPRGVRVNS VSPGPVETDL WLGDGGVAAT IAQAAGGDPA AIAAQAAAGS VTGRFTRPQE VADLVVFLAS DRAANITGAD VTIDGGLITT I
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