Gene Namu_5052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5052 
Symbol 
ID8450683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5636404 
End bp5637189 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID645044088 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003204312 
Protein GI258655156 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG ACCTCGACGG CCGCGTCGCC ATCGTCACCG GCGCGAGCAA GGGCATCGGC 
CTGGCGATCA CCCGGACCTT CGTCGACGAG GGGGTCCACG TCATGGCGGG CGCCCGCCGG
CTCTCCGACG AGTTGGCCGG GCTGGTCGAG GCCGGCGGGG CAACCTTCGT CCCGGTCGAC
CTGGCCACCG CCGACGCCGC CGACCAGCTG CTGGCGGCCG CCCTGGGCCG CGGCCGCGTG
GACATCCTGG TCAACAATGT CGGCGCCGTC GGCACCCGGC TCGACGGGTT CCTGGCCGTG
ACCGACGAGC AGTGGCTGAC CTCGCTGAAT CTGAACCTGA TGGCCGCCGT CCGGATGACC
CGGGCGGTGC TGCCCACCAT GCTGGCCGCC GGCGGCGGCA GCATCGTGAA CACCGGCTCG
GTCAACGCCT TCCTGCCCGA CCCGACCGTC ATCGACTACA GCGCCGGCAA GGCCGCGCTC
ACCAACCTGA GCAAGGCACT GTCCAAGGAG TTCGGACCGC GGGGCGTGCG GGTCAACAGC
GTGAGCCCGG GTCCGGTGGA GACCGACCTG TGGCTGGGCG ATGGCGGGGT GGCCGCCACC
ATCGCTCAGG CCGCCGGCGG TGATCCGGCC GCCATCGCGG CGCAGGCCGC GGCCGGCAGC
GTCACCGGCC GGTTCACCCG CCCGCAGGAG GTGGCCGACC TGGTTGTGTT CCTGGCCAGC
GACCGGGCGG CCAACATCAC CGGGGCCGAC GTCACGATCG ACGGCGGCCT GATCACGACG
ATCTGA
 
Protein sequence
MNLDLDGRVA IVTGASKGIG LAITRTFVDE GVHVMAGARR LSDELAGLVE AGGATFVPVD 
LATADAADQL LAAALGRGRV DILVNNVGAV GTRLDGFLAV TDEQWLTSLN LNLMAAVRMT
RAVLPTMLAA GGGSIVNTGS VNAFLPDPTV IDYSAGKAAL TNLSKALSKE FGPRGVRVNS
VSPGPVETDL WLGDGGVAAT IAQAAGGDPA AIAAQAAAGS VTGRFTRPQE VADLVVFLAS
DRAANITGAD VTIDGGLITT I