| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5045 |
|---|
| Symbol | |
|---|
| ID | 8450676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5629317 |
|---|
| End bp | 5629913 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645044081 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003204305 |
|---|
| Protein GI | 258655149 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCGGG GACCGGGACG GTCCGCGGCC CTGACGCGCA GCCGCATCTT GGCCGCGGCG
ACGGCCGAGT TCGCCGAGCG GGGGCTGGCC GGCGGGCGGG TCGACCGGAT CGCGGCGGCC
GCCGCAGCGA ACAAGGAACG GATCTACGCC TACTTCGGCA GCAAGGAAGG CCTGTTCGAC
GCCACCGTCG AGGCGATCAT CGGCGAGCTG GTGGACACCG TGCCGTTCGA CGCCCACGAC
CTGCCCGGCT ACGCGGGCCG CATGTTCGAC TTCACCCTGA CCCATCCGAG CCTGGTCCGG
CTGGCCCTGT GGTACAGCCT GGAGCGGACG GGATCGGTCG AGGACCTGCC GCAGGCGAAG
GCCTCCTCGG TGCGCAAGGT CGAGGCGCTG GCCGCGGCCC AGCGGGCGGG CGAGGTCGAC
GATGCCGTGC CGGCCGAGCG CCTGCTCCAG CTCATCCTCG GGGTGGTGCA GGGCAGCCTC
GTGCTGGCCG GGCGCCCGGC CGATGCGGCC GAGCTCGCCG AGCGCCGGGA GGCGACCTGC
CGGGCCGTCG CCCGGTTGAT CACCCCGTCG GACCCAGCGA TCCCACCGGC GGGCTGA
|
|---|
| Protein sequence | MVRGPGRSAA LTRSRILAAA TAEFAERGLA GGRVDRIAAA AAANKERIYA YFGSKEGLFD
ATVEAIIGEL VDTVPFDAHD LPGYAGRMFD FTLTHPSLVR LALWYSLERT GSVEDLPQAK
ASSVRKVEAL AAAQRAGEVD DAVPAERLLQ LILGVVQGSL VLAGRPADAA ELAERREATC
RAVARLITPS DPAIPPAG
|
|---|
| |