Gene Namu_5001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5001 
Symbol 
ID8450632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5578057 
End bp5579928 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content72% 
IMG OID645044039 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_003204263 
Protein GI258655107 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTCC CAGGAATCCC CGCACCGGCG CAGGCGGTCC GGCAGCTCTC GGCATCCATG 
CGGCTGGACA GCCCGGAGGC GGACGAGCTC CTGCGGGCGG ACTGGTTCGA CGAACGCCTG
CACACGGTGG CCGACGAGCT GGGCCAGGAC CCGGACGAGG TCCGGGCCGA GGCGGTCGGC
TACCTGCGGG AGATGGCCGC CACCCACGAC CCCCGCCCGA TGAACGCGTG GCGGGCGTTC
GGCCGCTGGT TCATGCGGGC CTACGACGTC TACGTCGACG ACGACCAGGT GCAGCGGCTG
CGCGAATTGG ACCGCCGCTG CTCGCTGGCC TTCGCCTTCG CCCACCGCTC CTACCTTGAC
GGGTTCGCCG TGCCCGAGGT CGTCGCGGCC AAACGGCTCA CCCCCGTATA CACGCTGGGC
GGGTCCAACC TGAACCTGTT CCCGTTCGGC CAGTGGGCCA GCCGGTCCGG GGTGGTGTTC
ATCCGGCGCA ACATCCGCGA GCTGCCGGTC TACCGGTTGA CCCTGCGGTC CTACATCGCC
GAACTGGTGC GCAGCCGCGG CAACCTGGCC TGGTCGATCG AGGGCGGTCG GACCCGCACC
GGCAAGCTCC GGCCCCCCAC GTTCGGCATC CTGAAGTACC TGGTCGACGG GTTGGACGAG
GCGACCCGGA CCGGCGACCC CGCGGTCCAC GGGCCCGGCC ACGTCGACGC CCTGGACATC
CAGGTCATCG GCGTGTCGAT CGTCTACGAC CAGTTGCACG AGGTCTCCCT GATGACCAAG
GAGGCCCGCG GCGCCGGCAA GCGGCCCGAG AACCTGCGCT GGCTGGTGCA TCTGGCCCGT
CAGCAGCAGC GCCGGCTGGG CCGGGCGTAC CTGGACTTCG GCGAACCGAT CCCGCTGCGG
CAGCGGCTGG CCGAGCTGCG GGCCGACCCG GCCACCGCCG ACCACGTGGT CGAACGGATC
GCGCTGGACG TGGCGCACCG GATCAACCGG GCCACCCCGG TGACCGCGAC CGCGGTGGTC
AGCCTGGCCC TGCTCGGCGC CGACCGGGCG CTGACCCTGG ACGAGATGCT GGCCACCGTC
CGTCCGCTGG CCCGCTACCT GAGCCGGCAG GGCTGGGCGG TGGCCGGCGC GCTCGACCTG
ACCGACCGGA CCACGATCCG GCGCACCCTG CAGGAGATGG TCTCCTCGCA CCTGATCGAC
GTGTTCGACG AGGGCACCGA ACCGGTCTGG CAGATCGCCC GCAACCGGGA CCTGGTCGCC
GCCTTCTACC GCAACACGAT GATCCACACG CTGGTGCACC GGGCGATCAC CGAGATGGCG
CTGCAGGCAG TCGTCGAGGA CGCGTCGGTG GACGTGTTCA CCGAGGCCAT GCGGTTGCGC
GAGCTGCTCA AGTACGAGTT CTACTTCCCG TCCCGGGCCC GGTTCGGCGA CGAGGTGCTG
ACCGAACTGC GGCTGATCGG CGCCGACGCG CCCGACCAGC ACTGGGCGTG CGGGTCGGAC
CGGGCGAAGG AATTGCTGGC CCGCTCGGAC CTGCAGGTCG CCCACCTGGT GCTGCGCCCC
TACCTGGACG CCTATCTGGT GGTCGCCGAC CGGCTGGCCG CCGAGCCGGC CGATCCGGAG
CCGGTCGACC AGGAGCGACT GCTCACCGAA TGTCTCGGGG TCGGCGAGCA GTGGTTGCTG
CAGCATCGCA TCGCCGGCGG CGAATCGGTG TCGTTGGAGC TGTTCCGGAC CGCGCTGCGG
GTGGCCGACA GCCGGGGGCT GCTGGCCGGC GGCACCGACC CGGCCGTGCG GGCCGCGTTC
ACCGCGGAGA TCGCCACCGA CGTCCGGCGC GCCGACGCCA TCGGCACGCT GGCCTGGGGC
GGTCAGCGGT GA
 
Protein sequence
MKLPGIPAPA QAVRQLSASM RLDSPEADEL LRADWFDERL HTVADELGQD PDEVRAEAVG 
YLREMAATHD PRPMNAWRAF GRWFMRAYDV YVDDDQVQRL RELDRRCSLA FAFAHRSYLD
GFAVPEVVAA KRLTPVYTLG GSNLNLFPFG QWASRSGVVF IRRNIRELPV YRLTLRSYIA
ELVRSRGNLA WSIEGGRTRT GKLRPPTFGI LKYLVDGLDE ATRTGDPAVH GPGHVDALDI
QVIGVSIVYD QLHEVSLMTK EARGAGKRPE NLRWLVHLAR QQQRRLGRAY LDFGEPIPLR
QRLAELRADP ATADHVVERI ALDVAHRINR ATPVTATAVV SLALLGADRA LTLDEMLATV
RPLARYLSRQ GWAVAGALDL TDRTTIRRTL QEMVSSHLID VFDEGTEPVW QIARNRDLVA
AFYRNTMIHT LVHRAITEMA LQAVVEDASV DVFTEAMRLR ELLKYEFYFP SRARFGDEVL
TELRLIGADA PDQHWACGSD RAKELLARSD LQVAHLVLRP YLDAYLVVAD RLAAEPADPE
PVDQERLLTE CLGVGEQWLL QHRIAGGESV SLELFRTALR VADSRGLLAG GTDPAVRAAF
TAEIATDVRR ADAIGTLAWG GQR