Gene Namu_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4980 
Symbol 
ID8450611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5563706 
End bp5564815 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content69% 
IMG OID645044018 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_003204242 
Protein GI258655086 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGA CGGCCGGAGA CGACTCGCGA ACGGACGATC CGTTCGAGAT AGCCGCGCAG 
GGGGTGCCCG GAGCGAACCC GCTGATCGGG CGCCCGGAAC CGGACAGCGC GGACACAATC
GACGCCCCCG GCACGATCCT GCCCGACGGG CGCCCGGAGG CGGGCATCTC GGGTCGGACG
GTGCGCTGGG GCGACCGCGT GTTCAAGGGG CTCGCCGCCG GGTCCGGGGC GATCCTGCTG
ATCGTGATGG CGGCGATCGC CATCTTCCTG GTCTGGAAGG CGATCCCGGC GTTCACCGGC
AACTCGGGGA GCCTGTTCAC CACCCAGACC TGGAACCCGC AGGGCAGCCC GCCGGTCTTC
GGCATGGCCG CGGTGTTCTT CGGCACGGTG GCCTCGGCGT TCATCGCGAT GCTCGTCGGC
GTCCCCGTCG CCATCGGCAT CGCCCTGTTC ATCTCGCACT ACGCGACCCG CCGGGCCGCC
ACCACCCTGG GCGCGATCGT GGACCTGCTG GCGGCCGTGC CGTCGCTGGT CTTCGGCATG
TGGGGGCTGT ACTTCCTGAT CCCGCAGACC AAGGGATTCC AGGCCTGGCT CAGCGAGTAC
TTCGGCTGGA TCCCGCTGTT CAACAACACC ACCGCGACCA GCGTCGACCA GTTCGGCAAA
TCCCTGCTGA TCGCCGGCAT CGTGCTCGCC ATCATGATCA TCCCGATCGT GTCGGCGGTC
TGCCGGGAGG TGTTCCTGCA GGTCCCGCGG GAGACCGTGG ACGCGGCCTG GGCCCTCGGC
GCCACCAAGT GGGAGATGAT CCGCACGGCG GTGCTGCCCT TCGGGCGCGC CGGCATCATC
TCGGCGGCCA TGCTCGGCCT GGGCCGGGCC CTCGGCGAGA CCATTGCGGT GGCCCTGGTG
CTCAACTCCG GTTTCCGGAT CAACTGGCAC CTCACCGAGC CCGGCGGCGA CACCTTCGCC
TCGACCATTG CCCTGAAGTT CGGCGAGGCC GGCGGCTCGC CGGTGGCCAT TGCCGCGCTG
ATCGCGGCCG GCCTGTTCCT GTTCGTCATC ACCCTGGTCG TCAACACCGC GGCCCGCATC
GTCATCGCGC GACGCAAGGA GTTCACATGA
 
Protein sequence
MVQTAGDDSR TDDPFEIAAQ GVPGANPLIG RPEPDSADTI DAPGTILPDG RPEAGISGRT 
VRWGDRVFKG LAAGSGAILL IVMAAIAIFL VWKAIPAFTG NSGSLFTTQT WNPQGSPPVF
GMAAVFFGTV ASAFIAMLVG VPVAIGIALF ISHYATRRAA TTLGAIVDLL AAVPSLVFGM
WGLYFLIPQT KGFQAWLSEY FGWIPLFNNT TATSVDQFGK SLLIAGIVLA IMIIPIVSAV
CREVFLQVPR ETVDAAWALG ATKWEMIRTA VLPFGRAGII SAAMLGLGRA LGETIAVALV
LNSGFRINWH LTEPGGDTFA STIALKFGEA GGSPVAIAAL IAAGLFLFVI TLVVNTAARI
VIARRKEFT