Gene Namu_4974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4974 
Symbol 
ID8450605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5556933 
End bp5558129 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content74% 
IMG OID645044012 
ProductTIM-barrel protein, nifR3 family 
Protein accessionYP_003204236 
Protein GI258655080 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCTCC CGTCCACCCT CACCCCAGCG AGCGCGACGA CCGCGCAGCC GGCGCCGAGC 
CCGGCGCCGG CTGCCGGCAC GCTGCAGATC GGTCCGTATC CCGTCTGGCC GCCGGTCGTG
CTGGCGCCGA TGGCCGGCGT CACCAACGCT CCGTTCCGCT CCCTGTGCCG TGAGTTCGGT
GCGGGGCTGT ACGTCTGCGA GATGATCACC ACCCGGGCGC TGGTGGCCGG CGACCCGAAG
TCACGGGCGA TGATGCGCTT CGAACCGGAC GAGCACCCGC GCTCGGTGCA GCTCTACGGG
GTCGACCCGG TGGTGGTCGG GCAGGCCGTG CGCCTGGTCG TCGAGCAGGA CCTGGCCGAC
CACATCGACC TGAACTTCGG CTGCCCGGTG CCCAAGGTCA CCCGCAAGGG CGGCGGTTCG
GCCATCCCCT ACAAGCGGCG GCTGTTCGAG TCGATCGTCC GGTCGGCCGT CGACCAGGCC
ACCCCGCACG GGGTTCCGGT CACCGTCAAG ATGCGCATCG GCATCGACTC CGACCACATC
ACCTACCTGG ACGCCGGCCG GATCGCCGAG GACGCCGGGG TGGCCGCGGT CGCCCTGCAC
GCCCGGACGG CGATCCAGCA CTACTCGGGA CAGGCGGACT GGGAGACGAT CGGCCGGCTC
AAGCAGGCGG TCACCTCGGT GCCGGTGCTG GGCAACGGCG ACATCTTCGC CGCCTCCGAC
GCGCTGACCA TGATGGCGAT GACCGGCTGC GACGGCGTCG TCGTCGGCCG CGGCTGCCAG
GGCCGGCCGT GGCTGTTCGC CGAGCTGGCC GCCGCCTTCG ACGGCCGGCC CGCCCCGACC
CCGCCGGACC TGCGCGCGGT GGCCGAGGTG ATGCGCCGGC ACGCGGTGCT GCTGGTCGCC
GAGATGGGCG CCGACCGCGG CATCCGGGAG CTGCGCAAGC ACACGGCCTG GTACCTGCGC
GGGTTCGCCG TCGGTTCGCA GGTCCGCCGC GAGCTCGGCA TGGTCGCCAG CCTGACCGAG
CTCGACGAGC TGATCGGTCA GCTCGACCTC GACCAGCCCT ATCCGCAGGC CGCCGAGGGA
CCCCGCGGCC GGCAGGGCAC GCCGCAGCGG CGGGTCGCGC TGCCGCACGG CTGGCTGGAC
GACCCGGAAT CGGCGGCCGT CCCGCATGAG GCCGAACTGG ACGACGGTGG CGGCTGA
 
Protein sequence
MHLPSTLTPA SATTAQPAPS PAPAAGTLQI GPYPVWPPVV LAPMAGVTNA PFRSLCREFG 
AGLYVCEMIT TRALVAGDPK SRAMMRFEPD EHPRSVQLYG VDPVVVGQAV RLVVEQDLAD
HIDLNFGCPV PKVTRKGGGS AIPYKRRLFE SIVRSAVDQA TPHGVPVTVK MRIGIDSDHI
TYLDAGRIAE DAGVAAVALH ARTAIQHYSG QADWETIGRL KQAVTSVPVL GNGDIFAASD
ALTMMAMTGC DGVVVGRGCQ GRPWLFAELA AAFDGRPAPT PPDLRAVAEV MRRHAVLLVA
EMGADRGIRE LRKHTAWYLR GFAVGSQVRR ELGMVASLTE LDELIGQLDL DQPYPQAAEG
PRGRQGTPQR RVALPHGWLD DPESAAVPHE AELDDGGG