Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4974 |
Symbol | |
ID | 8450605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5556933 |
End bp | 5558129 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645044012 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_003204236 |
Protein GI | 258655080 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATCTCC CGTCCACCCT CACCCCAGCG AGCGCGACGA CCGCGCAGCC GGCGCCGAGC CCGGCGCCGG CTGCCGGCAC GCTGCAGATC GGTCCGTATC CCGTCTGGCC GCCGGTCGTG CTGGCGCCGA TGGCCGGCGT CACCAACGCT CCGTTCCGCT CCCTGTGCCG TGAGTTCGGT GCGGGGCTGT ACGTCTGCGA GATGATCACC ACCCGGGCGC TGGTGGCCGG CGACCCGAAG TCACGGGCGA TGATGCGCTT CGAACCGGAC GAGCACCCGC GCTCGGTGCA GCTCTACGGG GTCGACCCGG TGGTGGTCGG GCAGGCCGTG CGCCTGGTCG TCGAGCAGGA CCTGGCCGAC CACATCGACC TGAACTTCGG CTGCCCGGTG CCCAAGGTCA CCCGCAAGGG CGGCGGTTCG GCCATCCCCT ACAAGCGGCG GCTGTTCGAG TCGATCGTCC GGTCGGCCGT CGACCAGGCC ACCCCGCACG GGGTTCCGGT CACCGTCAAG ATGCGCATCG GCATCGACTC CGACCACATC ACCTACCTGG ACGCCGGCCG GATCGCCGAG GACGCCGGGG TGGCCGCGGT CGCCCTGCAC GCCCGGACGG CGATCCAGCA CTACTCGGGA CAGGCGGACT GGGAGACGAT CGGCCGGCTC AAGCAGGCGG TCACCTCGGT GCCGGTGCTG GGCAACGGCG ACATCTTCGC CGCCTCCGAC GCGCTGACCA TGATGGCGAT GACCGGCTGC GACGGCGTCG TCGTCGGCCG CGGCTGCCAG GGCCGGCCGT GGCTGTTCGC CGAGCTGGCC GCCGCCTTCG ACGGCCGGCC CGCCCCGACC CCGCCGGACC TGCGCGCGGT GGCCGAGGTG ATGCGCCGGC ACGCGGTGCT GCTGGTCGCC GAGATGGGCG CCGACCGCGG CATCCGGGAG CTGCGCAAGC ACACGGCCTG GTACCTGCGC GGGTTCGCCG TCGGTTCGCA GGTCCGCCGC GAGCTCGGCA TGGTCGCCAG CCTGACCGAG CTCGACGAGC TGATCGGTCA GCTCGACCTC GACCAGCCCT ATCCGCAGGC CGCCGAGGGA CCCCGCGGCC GGCAGGGCAC GCCGCAGCGG CGGGTCGCGC TGCCGCACGG CTGGCTGGAC GACCCGGAAT CGGCGGCCGT CCCGCATGAG GCCGAACTGG ACGACGGTGG CGGCTGA
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Protein sequence | MHLPSTLTPA SATTAQPAPS PAPAAGTLQI GPYPVWPPVV LAPMAGVTNA PFRSLCREFG AGLYVCEMIT TRALVAGDPK SRAMMRFEPD EHPRSVQLYG VDPVVVGQAV RLVVEQDLAD HIDLNFGCPV PKVTRKGGGS AIPYKRRLFE SIVRSAVDQA TPHGVPVTVK MRIGIDSDHI TYLDAGRIAE DAGVAAVALH ARTAIQHYSG QADWETIGRL KQAVTSVPVL GNGDIFAASD ALTMMAMTGC DGVVVGRGCQ GRPWLFAELA AAFDGRPAPT PPDLRAVAEV MRRHAVLLVA EMGADRGIRE LRKHTAWYLR GFAVGSQVRR ELGMVASLTE LDELIGQLDL DQPYPQAAEG PRGRQGTPQR RVALPHGWLD DPESAAVPHE AELDDGGG
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