| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4961 |
|---|
| Symbol | |
|---|
| ID | 8450592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5542698 |
|---|
| End bp | 5544161 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645043999 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003204223 |
|---|
| Protein GI | 258655067 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTCA CCGACGAAAC CGTCACCCGC GTCCTGAACG CGGTCCCCAC CGGCCTGCTG
ATCGGCGGCA AGTGGATCAG CACCGAGCAC ACCATCGACG TGGAGAACCC GGCCACCGGG
CAGACCATCG CCCAGGTCGC GGACGCCACC CCGGAGCAGG GCATCGAGGC GCTGGACGCC
GCGGTGGCCG CCGCCGACGA CTGGGCCGCG ACCGATCCCC GGGCCCGCGG GGAGATCCTG
CGCAAGGCGT TCGAGCTGCT CACCGAGCGG GCCGAGGACA TCGCCCTGCT GATGACCCTG
GAGATGGGCA AGCCGCTGGC CGAGGCCCGC GGCGAGGTCA CCTACGGCGC CGAGTTCTTC
CGCTGGTTCT CCGAGGAGGC CGTGCGGATC TCCGGCCGGT TCTCCGTCGC CCCCTCCGGC
GGCACCCGGC TGCTGACCAT GAAGCAGCCG GTCGGCCCGG TCTACGCGAT CACCCCGTGG
AACTTCCCGC TGGCCATGGG CACCCGCAAG CTCGGCCCGG CCATCGCCGC CGGCTGCACC
AGTGTCATCA AGCCGGCCGC GCAGACCCCG CTGACCACCC TGGCCCTGGC CGCCGTGCTG
ATCGAGGCCG GCCTGCCCGA CGGCGTGGTC AACGTGATCA CCACCTCGCA CTCCGGGCCG
GTGTCCGAGC CGATCATCCG CGACCCGCGG CTGCGCAAGC TCACATTTAC CGGTTCCACC
GGGGTCGGCC GCCGGCTGAT CGAGCAGTCC GCGCAGAACG TGCTCAAGAC CTCGATGGAG
TTGGGCGGCA ATGCCCCGTT CCTGGTGTTC GCCGACGCCG ACCTGGACAA GGCCGTCGAG
GGCGCGATGC TGGCCAAGAT GCGCAACATC GGGGAGGCCT GCACCGCGGC CAACCGGCTG
CTGGTGCACT CCTCGGTCGC GGAGCAGTTC GCCGCCAAGC TGGCCGCGAA GATGGGCGCG
ATGACGATCG GCCCCGGCAT CGAGGACGGC GTGCAGGTCG GCCCGCTGGT CGACGCCGCC
GCGGTGGACA AGGTCACCGA GCTGGTCGCC GACGCCGTGG ACAAGGGTGC GACGGTCCTC
ACCGGCGGCG CCCCGATCGA CGGCCCCGGC CACTTCTACC CGCCGACCGT CCTCACCGGC
GTCGGCACCG ACGCCCGGGT GTTCACCGAG GAGATCTTCG GGCCGGTCGC CCCGATCATC
ACCTTCGACA CCGATGAGGA GGGCATCGCC AAGGCCAACG ACACTGAGTA CGGCCTGGTC
GCCTACGCCT TCACGGAGAA CCTGACCCGG GCGATCACCG TCGCCGAGAA GCTGCAGACC
GGCATGGTCG GCATCAACCA GGGCATCGTG TCCAACCCGG CCGCCCCGTT CGGCGGCGTC
AAGGCCTCCG GCCTGGGCCG CGAGGGCGGC GCCGAGGGCA TCGAGGAATA CCTGGAGACC
AAGTACGTCG GGATCAAGCT GTAG
|
|---|
| Protein sequence | MAVTDETVTR VLNAVPTGLL IGGKWISTEH TIDVENPATG QTIAQVADAT PEQGIEALDA
AVAAADDWAA TDPRARGEIL RKAFELLTER AEDIALLMTL EMGKPLAEAR GEVTYGAEFF
RWFSEEAVRI SGRFSVAPSG GTRLLTMKQP VGPVYAITPW NFPLAMGTRK LGPAIAAGCT
SVIKPAAQTP LTTLALAAVL IEAGLPDGVV NVITTSHSGP VSEPIIRDPR LRKLTFTGST
GVGRRLIEQS AQNVLKTSME LGGNAPFLVF ADADLDKAVE GAMLAKMRNI GEACTAANRL
LVHSSVAEQF AAKLAAKMGA MTIGPGIEDG VQVGPLVDAA AVDKVTELVA DAVDKGATVL
TGGAPIDGPG HFYPPTVLTG VGTDARVFTE EIFGPVAPII TFDTDEEGIA KANDTEYGLV
AYAFTENLTR AITVAEKLQT GMVGINQGIV SNPAAPFGGV KASGLGREGG AEGIEEYLET
KYVGIKL
|
|---|
| |