Gene Namu_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4955 
Symbol 
ID8450586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5533006 
End bp5534100 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID645043993 
Productpeptidase M48 Ste24p 
Protein accessionYP_003204217 
Protein GI258655061 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACT CCCCCGCCCG CCGGCGCGTC CGATTCCCGG GCATCAGTTC CCGGGCCTGG 
GAGCATCCGG CCCACCGGTC CGCGCTGGTC GCGCTGCGGG CCCTGCCGGG CTTCGACACC
CTGCTCAAGA CGATGGACGG CCTGTTCCGG GGCCGCAAGC AGCGGCTGAT GTTCCTGGCC
TCGGCGGTCC GGGTCGGCGA ACGGCAGTTC CCCGAGCTCG ATCGCCTGCT CACCGACGCC
GTCCTGACCC TGGACGCCCA GGAGCGGCCG GAGCTGTACG TGCTGCAGAG CCCGGAGGTC
AACGCGGTCA GCATCGGCAT GCAGCAGCCG TTCATCGTGC TGACCACCGG CCTGCTGGAC
CTGATGGAGC ACGAGGAGCT GCGGGTGGTG ATCGGGCACG AACTGGGCCA TGTGCTCAGC
GGCCACGCCG TCTACCAGAC CATGCTCGGC CACCTGCTGC GGGTCGCCGG CAACTTCGGC
TGGCTACCGG TCGGCGGCTG GTCGCTGCGG GCCCTGATCG CGGCGCTGTA CGAGTGGAGC
CGCAAGTCCG AGCTGTCCGG CGACCGGGCC GGCCTGCTGG TCTCGCAGGA CCCGCACGCA
TCGATCCGGG TGATGATGAA GATCGCCGGC GGCGCCGGGC TGGCCCAGAT GGACACGGTG
GCGTTCATGG AGCAGGCCGC CGAGTACGAA TCGACCGGCG ACGCCCGGGA CAGCCTGGCC
AAGCTGATGA ACGTCGAGCT GCAGACGCAC CCGTTCTCGG TGATGCGGGC CGGCCAGATC
CGGTCCTGGG TCGACCACGG CGAGTACAAG GCGATCCTGA GCGGGAAATA CCCCCTGCGG
GTTGACGATC CGCAGGCCTC GGTGACCGAT CAGGTCAAGG CGGCCGCCCG CAGCTACCGG
GACAACCTGA CCACATCCAA GGATCCGCTC ACCCAGAAGG TGGTCGGTGC GACCCGCAAC
CTCGGCGGCG CCGCGCAGAA CGCCGGGCAG AACGTGGCCA GCGCGCTGGC CACCCTCTGG
CGGCAGGCCA ACCAGGGCGG CACCGACATC GACGGGTCCG CGGATGAAGG GCCGGCGGGC
GCACCGCGTC CCTGA
 
Protein sequence
MSNSPARRRV RFPGISSRAW EHPAHRSALV ALRALPGFDT LLKTMDGLFR GRKQRLMFLA 
SAVRVGERQF PELDRLLTDA VLTLDAQERP ELYVLQSPEV NAVSIGMQQP FIVLTTGLLD
LMEHEELRVV IGHELGHVLS GHAVYQTMLG HLLRVAGNFG WLPVGGWSLR ALIAALYEWS
RKSELSGDRA GLLVSQDPHA SIRVMMKIAG GAGLAQMDTV AFMEQAAEYE STGDARDSLA
KLMNVELQTH PFSVMRAGQI RSWVDHGEYK AILSGKYPLR VDDPQASVTD QVKAAARSYR
DNLTTSKDPL TQKVVGATRN LGGAAQNAGQ NVASALATLW RQANQGGTDI DGSADEGPAG
APRP