| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4945 |
|---|
| Symbol | |
|---|
| ID | 8450576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5522139 |
|---|
| End bp | 5522954 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645043983 |
|---|
| Product | general secretion pathway protein-related protein |
|---|
| Protein accession | YP_003204207 |
|---|
| Protein GI | 258655051 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC AACGGCTCCA GGCCCACTAC GGGTTCACCC GCATGCCGTT CGGCCGGAAC
CTGGCCCCGG GCATGCTGCA CCGGCACCGC GGACTGGGCG AAGCGATCGC CCGGATCAGC
TGGTGCGTCG ACCAACACGC CCTCGGCGTG ATCACCGGCG AGGTCGGCGC CGGCAAGACC
GTCGCCGTCC GCGCCGCCAC CGCCGCCCTG GACAGCAGCC GACACGTCGT CATCTACCTG
CCCAACCCCT CCGTCGGGGT CCGCGGCATG CTCCACCACA TCGTCGCCGC CCTCGGCCGG
ACCCCGTCGT TCTACACCGC GACCCTGGCC CCGCAAGCCG CCGACGCCCT GGCCGCCGAA
CACGCCGAAC GCGGCCGCAC CCCCGTCGTG GTCATCGACG AAGCCCACCT GCTGGACAAC
CAGCAACTCG AAGCACTACG CATGCTGTCC AACCACGACA TGGACTCCGG CAGCCCGTTC
GCAGCCCTGC TCGTCGGGCA ACCCACCCTG CGGCACCGGC TCCGCCTCGG GGTGCTCGCC
GCCCTGGACC AACGGATCTC CGTGCGCTGC ACCCTGACCG GGATGACCGA CCAGGAAACC
GCCGACTACC TCACCCACCA CCTCAAAATC GCCGGCCGCA GCGACACCCT GTTCAGCGGC
GACGCCATCA CCCTGATCCA CAACGCCGCC CGCGGCTACC CCCGCGCCGT CAACAACCTC
GCGATCAACG CGCTGACCGC TGCGTTCGCC CGCAACCAAG CCATCGTCGA CGAGAAATCC
GCCCGCGCCG CGATCGCCGA AACCGGCGGC GACTAA
|
|---|
| Protein sequence | MSVQRLQAHY GFTRMPFGRN LAPGMLHRHR GLGEAIARIS WCVDQHALGV ITGEVGAGKT
VAVRAATAAL DSSRHVVIYL PNPSVGVRGM LHHIVAALGR TPSFYTATLA PQAADALAAE
HAERGRTPVV VIDEAHLLDN QQLEALRMLS NHDMDSGSPF AALLVGQPTL RHRLRLGVLA
ALDQRISVRC TLTGMTDQET ADYLTHHLKI AGRSDTLFSG DAITLIHNAA RGYPRAVNNL
AINALTAAFA RNQAIVDEKS ARAAIAETGG D
|
|---|
| |