| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4928 |
|---|
| Symbol | |
|---|
| ID | 8450559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5502354 |
|---|
| End bp | 5503160 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645043967 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003204191 |
|---|
| Protein GI | 258655035 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGCA TTCCGCCGAT CAAGGTCGGC ATGTCGACGG CGGCCGTCTA TCCGGAGTCG
ACGGCCCGGG CCTTCGCCCG CGCCGCCGAA CTGGGGTACG ACGGCGTCGA GGTGATGGTG
CAGACCGAGG CGGTCAGCCA GGACCCGCTG GCCTTGGCCG GGCTGGTCGA CGAGTACGCC
CTGCCGGTGC TCTCGGTGCA CTCGCCGTGC CTGCTGGTGA CCGCCCGGGT GTGGTCGACC
GACCCGCTGG TCAAGCTGGC CCGCTCGATC GACATGGCCG AGCGGCTGGG TGCCGGCACC
GTGGTGGTCC ATCCGCCCTT TCTCTGGCAG CGGGCGGCGG CCGCCCATTT CACCGACGGC
GTCGCCGAAT TGCAGGACCG CACGCCCGTG CGCATTGCCG TGGAGAACAT GTTCCCGGTG
AAGGTGCGGG GCACGGTGGT GAACAGTTAC CGGCCGCATT GGAATCCGGT TCCGGCCGGG
CACCGCTGGT TCACCCTGGA CCTGTCGCAC ACCGCCACCT CGGGCACCGA CGCGATCGAG
TTGGCCGACC AGATGGGCGA GCGGCTGGCC CATCTGCATC TGGCCGACGG CTCGGGGTCG
AGCAAGGACG AGCACCTGGT GCCCGGCCGG GGCGCCCAGC CGTGTGGGGA AATCCTGGAA
GGCCTGGCCC GCAACGGGTT CGACGGATCG GTGGTGGTCG AGATCTCGAC CCGGGGCAAG
ACCGCCGATG CCCGGGAGAT CGACCTGGCC GAGGCGTTGA CATTCGCCCG CTTGAATCTG
GCCACCTTCT CGCCCGGCGG TCAATAA
|
|---|
| Protein sequence | MIRIPPIKVG MSTAAVYPES TARAFARAAE LGYDGVEVMV QTEAVSQDPL ALAGLVDEYA
LPVLSVHSPC LLVTARVWST DPLVKLARSI DMAERLGAGT VVVHPPFLWQ RAAAAHFTDG
VAELQDRTPV RIAVENMFPV KVRGTVVNSY RPHWNPVPAG HRWFTLDLSH TATSGTDAIE
LADQMGERLA HLHLADGSGS SKDEHLVPGR GAQPCGEILE GLARNGFDGS VVVEISTRGK
TADAREIDLA EALTFARLNL ATFSPGGQ
|
|---|
| |