Gene Namu_4924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4924 
Symbol 
ID8450555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5497546 
End bp5498526 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content77% 
IMG OID645043963 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_003204187 
Protein GI258655031 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA ATTCCCAACG CCGCGGCGCG ATGCGCAAGA CGGGCACCAA GAAGGGTGCC 
GTCATCGGCA GCGGCGGCCG GGCCCGGCGG GCGCTGGAAG GCCGGGGGCC GACGCCGCCC
GCGGAGATGC GCAAGGGCCA CCCGGCCTCC CGGAAGGCGG CCGCCGCCGC CAAGTCCAAG
CCCCGCCCGG ACTCGCGGCC GACCACCCGA CCGCGGGGCG AGCTGCCGGA GACGGTGGTC
GGCCGGAACC CGGTGGTCGA GGCCCTGCGG GCCGGGGTGC CGGCCACCGC GCTGTACGTG
GCCGGCGGGC TGGCCACCGA CGAGCGGATC GCCGAGGCCA TCACCGGCGC GGCCGAGCGG
GGCATCCCGC AGCTGGACGT CTCGCGTCCG GAGCTGGACC GGCTCACCGG CAACGCCATC
CACCAGGGCG TGGCCCTGGT CGTCCCGCCG TACCAGTACG CGCACCCGGA GGATCTGCTC
AGCCGGGCCC GGGACTCGGG GCGGGCCGCA CTGATCGTCG CCGTCGACGG CGTCACCGAC
CCGCGGAACC TGGGCGCGAT CGTCCGGTCG GCCGCCGCGT TCGGCGCGCA CGGCGTCGTC
GTGCCCGAAC GGCGCAGCGC CGGCATGACC GCCTCGGCCT GGCGCACGTC GGCCGGCACC
GCCGCCCGGC TGCGGGTGGC GCGCTGCACC AACCTGGTCC GCACCCTCAA GGACTACGCC
GCCCAGGGCC TGATGATCGC CGGCCTGGAC GCCGACGGCA CCACCGACAC CGACTCGTTC
GAGCTGGCCA CCTCGCCGCT GGTGCTCGTC GTCGGCTCCG AGGGCCGCGG CCTGGCCCGG
CTGACCCGCA CGGTCTGCGA CGTCACCGTG TCCATCCCGA TGGCCCGCTC GGTCGAGTCG
CTCAACGCCT CGGTCGCCGC CGGCGTCGTG CTGGCCGAGG TCGCCCGCCG TCGCCGGCTG
GAGACCCCCA CCCCCGACTG A
 
Protein sequence
MAGNSQRRGA MRKTGTKKGA VIGSGGRARR ALEGRGPTPP AEMRKGHPAS RKAAAAAKSK 
PRPDSRPTTR PRGELPETVV GRNPVVEALR AGVPATALYV AGGLATDERI AEAITGAAER
GIPQLDVSRP ELDRLTGNAI HQGVALVVPP YQYAHPEDLL SRARDSGRAA LIVAVDGVTD
PRNLGAIVRS AAAFGAHGVV VPERRSAGMT ASAWRTSAGT AARLRVARCT NLVRTLKDYA
AQGLMIAGLD ADGTTDTDSF ELATSPLVLV VGSEGRGLAR LTRTVCDVTV SIPMARSVES
LNASVAAGVV LAEVARRRRL ETPTPD