Gene Namu_4875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4875 
Symbol 
ID8450505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5435834 
End bp5437573 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content73% 
IMG OID645043913 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003204138 
Protein GI258654982 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC CCACCCCGCC GTCGGTCACC GTGACCGGCG TGCCCATCCA CGGCCGGCGG 
CCGGTCCGCC CGACCCTGGT CATCGCCGTG TTCTGCCTGG GCCTGTTCTT GACCCTGCTG
GACATCACGA TCGTCAACAT CGCCATCCCC GACCTGGTCA CCGACCTGAA CGCCACGCTG
GAGACCGTGC TGTGGGTGGG CTCGGCCTAC TCGTTGACCT ACACCGTGCT GCTGATCACG
GCCGGCCGGT TGGGTGACAT CCACGGGCCG CGGCGGCTGT TCCTGATCGG GCTGGCCGTG
TTCACCCTGG CCAGCCTGGC CTCGGGGCTG TCCCAGACGC CGGGTCAGCT GATCGCGTTC
CGGGCGATGC AGGGCGTCGG GGCCGCCCTG CTGGCACCGC AGGGACTGCC GATCATCACC
TCGATCCTGC CGCCGGCCAA GCGAGGCCCG GCCTTTGCCG CGACCGGCAT CATGTCCGGC
CTGGGGGTGC TGGCCGGTCC GACCCTGGGC GGCCTGCTGG TGACCCACGT GGGCTGGCGC
TGGATCTTCT TCCTGAACAT CCCGATCGGG GTGGCCGCGT TCGCGCTGGC GTTCGCCGTC
ATGCCCGATG TGCGGCCCGG CCGGCGGCAC CGGCTCGACC TGGTCGGCGT GGCCCTGCTC
ACCGCCGGCC TGCTCGGGGT GGTGTTCGGG CTGATCGAGG GTGAGCGGTA CGACTGGGGC
ACGGTCGCCG GGTTCGTCAC CATCCCGATG ATCATCGCCG GTGGAGCCGT CCTGCTCGTC
CTGTTCCTGT GGCGTCAGGC GGTCACCCAG GACCGGGAAC CGTTGCTGCC GTTCGCCGTC
TTCGCCGATC GCAGCTTCAC CGTGATGACC CTGGTCTTGC TGGCCATGGG GTTTGCCATG
GTCGGCATGT TCCTGCCGCT GACCATCTAC TACCAGTCGG TGGTCGGGCT GACCGCGATC
GCCGCCGGGC TCGTCATCGG CATCCAGTCG ATGGCCATGA TGATCACCTC CGGGATTGTC
GGCGGTCTGT CCGGCTCCGG CCGGATCCCG ATGAAGTGGG TGCTCTTCGC CGGGTTGCTG
CTGTTCGCCG GCGGCATGGT CGAGATCGCG GCGGTGGCCA CGCCGGACTC CGCGTGGTGG
GTGTTCGTAC CCGGGCTGGT CGCGGCCGGG ATCGGGCTGG GCTGCGTCTG GACCCCGGTG
TTCGGGCTGG CCACCCGGGA CATGCTGCCG GCCCGGGCCG GGGTGGGTGC CGGCGTGCTG
GACACGGTCC AGGAGTTCGG GGCGGTGCTG GCCACGGCGA TCCTGGGTGC GGTCCTGGCC
AACCGGCTGG CCGATGCCAT GGTCGCGCAG GCCCAGCTGG TCGCCGCCGG ACTGCCGGCG
GCGGCCCGGG CGCCGTTCGT GGACGGGCTG ACCCAGGCGG CGCACGGCGG GTTGTCGGTG
GGCGCGGGGC AGGCGCAGTC CTCGTGGCCG GCCGACGTGC CGGCGGCCCT GGCCGACCAG
CTGGCCGCGG CCGCGCAGCA GACCTTCGCG GCCGCGTTCA CCGACGCCAT GGGCCCGGTG
ATCCGGGTGG CGATCGGGGT CGTCCTGGCC GCGGCGGTCG CCGTGCTGTT CGTGCGATCG
CGGAGCACGG TCGCCGGTGC CGGTGCCGGT GCCGGTGCCG GTGCCGGTGC CGGTCCGGTC
GCCGGTGCGG TCGCCGGCGC CGATCCAGCG GCCGCGCCGG AGCGGGCCGA GGCGTCCTGA
 
Protein sequence
MSAPTPPSVT VTGVPIHGRR PVRPTLVIAV FCLGLFLTLL DITIVNIAIP DLVTDLNATL 
ETVLWVGSAY SLTYTVLLIT AGRLGDIHGP RRLFLIGLAV FTLASLASGL SQTPGQLIAF
RAMQGVGAAL LAPQGLPIIT SILPPAKRGP AFAATGIMSG LGVLAGPTLG GLLVTHVGWR
WIFFLNIPIG VAAFALAFAV MPDVRPGRRH RLDLVGVALL TAGLLGVVFG LIEGERYDWG
TVAGFVTIPM IIAGGAVLLV LFLWRQAVTQ DREPLLPFAV FADRSFTVMT LVLLAMGFAM
VGMFLPLTIY YQSVVGLTAI AAGLVIGIQS MAMMITSGIV GGLSGSGRIP MKWVLFAGLL
LFAGGMVEIA AVATPDSAWW VFVPGLVAAG IGLGCVWTPV FGLATRDMLP ARAGVGAGVL
DTVQEFGAVL ATAILGAVLA NRLADAMVAQ AQLVAAGLPA AARAPFVDGL TQAAHGGLSV
GAGQAQSSWP ADVPAALADQ LAAAAQQTFA AAFTDAMGPV IRVAIGVVLA AAVAVLFVRS
RSTVAGAGAG AGAGAGAGPV AGAVAGADPA AAPERAEAS