Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4824 |
Symbol | |
ID | 8450454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5376618 |
End bp | 5378756 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645043863 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003204088 |
Protein GI | 258654932 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.329742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGA TCTCGCTCTC GCTGCACGAC GCCCTGGCCA AGGTCCGGGA TGCGCCCTTC CTGCTCGATG CGATCCGCGC GTCCGAGTCG CTGACCGAGG CGGCCGGGCG GGACGGCGGC CCCTACACGG TCAAGGTGCT CACCCGAGCG GTCCAGGACG CCGACGACCA GCTGATGGCC ATCGCCGCCG TCCACGGTCT GGGCGCGGTC TTCGACGAGG GCGCCGGTGA GGTGCTCTCC GCCCTGCTCT CGGACCCGCG GACGTTCCTG CGGGAGCATG CGGCGTGGGC GTTGGGCTCC CGGGTGCCGC GGCTGGACGC CATCGGCCGG CTGATCTCCG GCATCGCCGA CGGCGGTTTC GCCACCGTGA TCAATCAGCG GGCGCTGCGC CGCTGGGCCC AGGTCACCCC GGACCACATC GCGCTGGCCC TGGAGGGCGC GCTGCTCGGG ACGGACGACC CCGACCGCCG GGCCCGGTTG ATGGACACGA TGGGCCTGGT GCCGGGCCCG GTCGCCGACG CCGTCCTGCT GCGAGCCGCG GCCGACGAGC GGGAGTCGTC GCGCCCCCGG CAGGCCGCGA TCGCCGCGAT CGGCGACCGG AGGACGGCCG GCGCCGGGGC CGAGCTGATC CACCGGCTGG CCCGCAGCGA GGGCGAGCTG GCCGGGGTGG CCCGGCTGGC CGCGTTCGAC CTGGCCGGTG TGGCCGACGA CCGGGGGTCG ACCGGGCCGG GGTTGGCGGT GGCCCAGTTG TTCCTGCACG CCGACCTCGA CCGGGAGCTG AGCCGGGCCG GAGCCGGCGA CAACGGTGGC ATCGCCACCA TGCTGGTCCG GCTCGGCGAC GCGCTGGCCG CCGAGCCCGG GATCTCCCGG GTGCTCACGC TGTCCCGGGG CACGGTCGAC GCCGCGGTCG ACGCACTGAT CCACCCGTCC ACCGGTCACG TGCTCTCCCC GGTCCCGCTG ATGGCCGAAC CGACCGACGC GGCCAGCGCC TGGCCGGTCT CGGTGGCCGC GGAGCGGGGG ATCCGCCGGG CCCTGACCTC GCACGGCCGG GTCGACGTGA TGCACCTGCG GATGGCCGAC GTCGGCAGCA TGGCGGCGGC CGCGGTGGCC ACCCGGTTGG GCATCCCCAC CGTGTTCACG CTGGCCCCGG ATCCGCACGC GGTCATCCAC GCCCTGGACA TGACGGGCGC GTTGACCCGG GCCACCTTCG GCGCGGTCGA CGAGCGTGAG CACTACTGGT TCCGGACCGG GTTGGTCGCC CGGTTGGCCG CCGGGGCGCA GCACCGGGCC CTGTTCCCCC GGCCGGACCT GCGCGAACAG CTGCGGGACC TGCTGGGCAT CGACATCCGG ACCGATCCGG GCGGGTCCAC CGTCGTGCCC GAGGGGATCG ACGTGGCGGT CAGCGACCGG GCCCGGGCCC AGGTCGTCCG CTTCGCCGGG CCCGGCCTGG GTGAGCCGCG AGCCCTGAAC GAGCTGGCCG ACCTGGTCGC CGCGCTGCCC GAGCACCGCC GGGGCCTGCC GCTCGCGCTC AGCGTCGGCC GCCTGCATCG GGTGAAGGGG ATGGCCACCG TCGTCGAGGC GTGGGCGGCC GTCCCGGCCC TGCGGGACCG CTGCAACCTG CTCATCGTCG GCGGCGACCT GCAGCGGCCG TCGGTCGACG AACGGGACCA GCTCGACCGG ATCGCCGGGG TGATCGCCCA GCACCCGGAC GCCGCCGCCG GACTGCTGCT GCCCGGCCAT CGGCCCAACG ACGTGATCGC CGCGTGGATG GCCGCCGCCC AGCTGGGCCT GCCCGGTTCC GTCGCGCCTG GTGGCGTGTA CGTCTGCGGG AGCCTGAAGG AGGAGTTCGG GTTGGCCGTG ATCGAGGCGC TGGCCGCCGG TCTGCCGGTC GTCGCGCCCG ACGGCGGTGG CCCGGCCACC TACGTCGAGG AGGGGGTGAC CGGGTTCCTG GTCGACACCC GCTCGCCGCG GGCCGTCGCC GGCGGTCTCG CGGCCGCGTT GGAGTTGCCG GGCAAGCCCG GCGTCGACGA GCGGCTGGCC CGGGCCCGGG CCACCGTCAC GGACCGGTTC ACGCTGCAGG CGATGGCCCG GACCCTGGCC GAGGTCTATG CCGGCGTCAC CGCGCCGGTG GCGGGGTGA
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Protein sequence | MSLISLSLHD ALAKVRDAPF LLDAIRASES LTEAAGRDGG PYTVKVLTRA VQDADDQLMA IAAVHGLGAV FDEGAGEVLS ALLSDPRTFL REHAAWALGS RVPRLDAIGR LISGIADGGF ATVINQRALR RWAQVTPDHI ALALEGALLG TDDPDRRARL MDTMGLVPGP VADAVLLRAA ADERESSRPR QAAIAAIGDR RTAGAGAELI HRLARSEGEL AGVARLAAFD LAGVADDRGS TGPGLAVAQL FLHADLDREL SRAGAGDNGG IATMLVRLGD ALAAEPGISR VLTLSRGTVD AAVDALIHPS TGHVLSPVPL MAEPTDAASA WPVSVAAERG IRRALTSHGR VDVMHLRMAD VGSMAAAAVA TRLGIPTVFT LAPDPHAVIH ALDMTGALTR ATFGAVDERE HYWFRTGLVA RLAAGAQHRA LFPRPDLREQ LRDLLGIDIR TDPGGSTVVP EGIDVAVSDR ARAQVVRFAG PGLGEPRALN ELADLVAALP EHRRGLPLAL SVGRLHRVKG MATVVEAWAA VPALRDRCNL LIVGGDLQRP SVDERDQLDR IAGVIAQHPD AAAGLLLPGH RPNDVIAAWM AAAQLGLPGS VAPGGVYVCG SLKEEFGLAV IEALAAGLPV VAPDGGGPAT YVEEGVTGFL VDTRSPRAVA GGLAAALELP GKPGVDERLA RARATVTDRF TLQAMARTLA EVYAGVTAPV AG
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