Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4797 |
Symbol | |
ID | 8450427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5336822 |
End bp | 5337541 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645043837 |
Product | LmbE family protein |
Protein accession | YP_003204062 |
Protein GI | 258654906 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.861098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACA CCCTGGAGCC CTTCCCCGAC GACTGGCAGA CCGCGCTGTG CATCGCCGCG CATCCCGACG ATCTGGAGTA CGGCACGGCG AGTGCGGTGG CCGCCTGGAC CCGGGCCGGC AAGACCGTCA CCTACCTGCT GGTGACCTCC GGGGAGGCCG GCATCGACGG GCTCGACCCG GCCGAGTGCG GCCCGCTGCG CGAGGCCGAG GAGCGGGCCG GGGCGGCCGA AGTCGGGGTC GAATCGGTGG AGTTTCTGGG CTACCCGGAC GGGGTCGTGG AGTACGGGCT GCCGCTGCGC CGGGACATCG CCCGGGTGAT CCGGCGCCGC CGCCCCGATC TGGTGGTCGC CTCCAACCCG GACCCGCGAC CGGCCTGGGG CGGCATCGAC TACGCCGACC ACCGGGCGGT CGGCCTGGCC GCCGTCGACG GCGTGCGAGA TGCCGGCAAC CGCTGGGTCT TCCGGGAGCT GGTCGACGAG GGGCTGCCGC CGTGGAAGGC GCGCTACACC GCGCTGGCCG CCTCCCCGCG CGCCGCCCAC GCGGTCGACG TGACCGACAC CCTGGAGTCC GGCATCGCCT CGTTGAACGC GCACCGGCGG TACCTGGAGG GACTGGGCGA CGACGCGCCC GACGTGGCGC AGATGCTGCG CGGGTTCGCC GAGATGAGCG CGCCCCGGTT CGGGGGCCGG CCGGCGGTCG CCTACGAATT GCTGGCCTGA
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Protein sequence | MTDTLEPFPD DWQTALCIAA HPDDLEYGTA SAVAAWTRAG KTVTYLLVTS GEAGIDGLDP AECGPLREAE ERAGAAEVGV ESVEFLGYPD GVVEYGLPLR RDIARVIRRR RPDLVVASNP DPRPAWGGID YADHRAVGLA AVDGVRDAGN RWVFRELVDE GLPPWKARYT ALAASPRAAH AVDVTDTLES GIASLNAHRR YLEGLGDDAP DVAQMLRGFA EMSAPRFGGR PAVAYELLA
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