Gene Namu_4797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4797 
Symbol 
ID8450427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5336822 
End bp5337541 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content75% 
IMG OID645043837 
ProductLmbE family protein 
Protein accessionYP_003204062 
Protein GI258654906 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.861098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA CCCTGGAGCC CTTCCCCGAC GACTGGCAGA CCGCGCTGTG CATCGCCGCG 
CATCCCGACG ATCTGGAGTA CGGCACGGCG AGTGCGGTGG CCGCCTGGAC CCGGGCCGGC
AAGACCGTCA CCTACCTGCT GGTGACCTCC GGGGAGGCCG GCATCGACGG GCTCGACCCG
GCCGAGTGCG GCCCGCTGCG CGAGGCCGAG GAGCGGGCCG GGGCGGCCGA AGTCGGGGTC
GAATCGGTGG AGTTTCTGGG CTACCCGGAC GGGGTCGTGG AGTACGGGCT GCCGCTGCGC
CGGGACATCG CCCGGGTGAT CCGGCGCCGC CGCCCCGATC TGGTGGTCGC CTCCAACCCG
GACCCGCGAC CGGCCTGGGG CGGCATCGAC TACGCCGACC ACCGGGCGGT CGGCCTGGCC
GCCGTCGACG GCGTGCGAGA TGCCGGCAAC CGCTGGGTCT TCCGGGAGCT GGTCGACGAG
GGGCTGCCGC CGTGGAAGGC GCGCTACACC GCGCTGGCCG CCTCCCCGCG CGCCGCCCAC
GCGGTCGACG TGACCGACAC CCTGGAGTCC GGCATCGCCT CGTTGAACGC GCACCGGCGG
TACCTGGAGG GACTGGGCGA CGACGCGCCC GACGTGGCGC AGATGCTGCG CGGGTTCGCC
GAGATGAGCG CGCCCCGGTT CGGGGGCCGG CCGGCGGTCG CCTACGAATT GCTGGCCTGA
 
Protein sequence
MTDTLEPFPD DWQTALCIAA HPDDLEYGTA SAVAAWTRAG KTVTYLLVTS GEAGIDGLDP 
AECGPLREAE ERAGAAEVGV ESVEFLGYPD GVVEYGLPLR RDIARVIRRR RPDLVVASNP
DPRPAWGGID YADHRAVGLA AVDGVRDAGN RWVFRELVDE GLPPWKARYT ALAASPRAAH
AVDVTDTLES GIASLNAHRR YLEGLGDDAP DVAQMLRGFA EMSAPRFGGR PAVAYELLA