| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4794 |
|---|
| Symbol | |
|---|
| ID | 8450424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5332337 |
|---|
| End bp | 5334001 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645043834 |
|---|
| Product | helicase domain protein |
|---|
| Protein accession | YP_003204059 |
|---|
| Protein GI | 258654903 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.767422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG GACCGTTGAT CGTCCAGTCC GACAAGACGC TGCTGCTGGA GGTGTCCCAC
CCGGACGCCC CGGCCGCCCG CGCGAATATT GCCCCGTTCG CCGAACTCGA ACGCTCCCCC
GAGCACGTGC ACACCTACCG GATCACCCCG CTGGCGCTGT GGAACGCGCG GGCCGCCGGG
CACGACGCCG AGCAGGTGGT CGACGCGCTG GTCCGCTGGT CCCGGTTCCC GGTGCCGCAG
GCCCTGCTGG TCGACGTGGT GGACACGATG AGCCGCTACG GCCGGCTGGT ACTGCAGGCC
AACCCGGCGC ACGGGCTGAT CCTGGCTTCC CGGGACCGTG CCGTGCTCGA AGAGATCATG
CGGCACAAGA AGATCGCCCC GATGCTGGGT GTGCGGATCG ACCCGGACAC CGTGGCGGTC
CACCCCTCCC AGCGCGGCCA TCTCAAGCAG CAACTGCTCA AGGTCGGCTG GCCGGCCGAG
GACGAGGCCG GCTACGTCGA CGGTGAGGCC CACCCGATCG CCCTGGACAC CACCGACTGG
TCGCTGCGCT CGTACCAGCA GGAGGCGGTC GACGGGTTCT GGGACGGTGG GTCCGGCGTG
GTGGTGCTGC CCTGTGGGGC CGGCAAGACG CTGGTCGGCG CGGCCGCGAT GGCCAAGGCC
CAGGCCACCA CGTTGATCCT GGTCACCAAC ACGGTGTCCG GCCGGCAGTG GAAGCGGGAA
CTGATCGCCC GCACCTCGCT GACCGAGGAG GAGATCGGCG AGTACTCCGG CGAGCGCAAG
GAGATCCGGC CCGTCACCAT CGCCACCTAT CAGGTGATGA CCCGCAAGTC CGGCGGCCAG
TACCGGCACC TGGACCTGTT CGACTCCCGC GACTGGGGGC TGGTCATCTA CGACGAGGTG
CACCTGCTGC CGGCGCCGGT GTTCCGGATG ACCGCGGACC TGCAGTCCCG CCGGCGGCTC
GGGCTGACCG CCACCCTGGT CCGCGAGGAC GGGCGCGAGG GTGACGTGTT CTCGCTGATC
GGACCCAAGC GGTACGACGC GCCGTGGAAG GACATCGAGT CGCAGGGCTG GATCGCGCCG
GCCGAGTGCA CCGAGGTCCG GGTCACCCTG ACCGACCACG AACGCCTGAC CTACGCCACC
GCCGAGCCCG AGGAGCGGTA CAAGATCGCC TCCACCGCGC GGACCAAGCT GCCGGTGGTG
CGCACCGTGC TGGACCGGCA CCCCGGCGAG CCGACCCTGG TCATCGGCGC CTACCTGGAC
CAGCTGGAGG AACTGGGCGA GGAGCTGCAG GCGCCGATCA TCCAGGGCTC CACCCGCAAC
GCCGAGCGTG AGCGCTTGTT CGACGCGTTC CGGGCCGGCG AGATCAAGAC CCTGGTCGTG
TCCAAGGTGG CCAACTTCTC CATCGACCTG CCGGACGCCA CCGTCGCCAT CCAGGTCTCC
GGCACCTTCG GCTCGCGGCA GGAGGAGGCG CAGCGGTTGG GCCGGCTGCT GCGACCCAAG
GGCGACGGGC GGCAGGCGCA CTTCTACTCG ATCGTCAGCC GGGACACCCT GGACACCGAC
TACGCCGCGC ACCGGCAGCG GTTCCTGGCC GAGCAGGGGT ACGCCTACCG CATCGTGGAC
GCCGACGACC TGCTCGGCCC GGCGATCCCG GGCGGCGAGG AGTAG
|
|---|
| Protein sequence | MTDGPLIVQS DKTLLLEVSH PDAPAARANI APFAELERSP EHVHTYRITP LALWNARAAG
HDAEQVVDAL VRWSRFPVPQ ALLVDVVDTM SRYGRLVLQA NPAHGLILAS RDRAVLEEIM
RHKKIAPMLG VRIDPDTVAV HPSQRGHLKQ QLLKVGWPAE DEAGYVDGEA HPIALDTTDW
SLRSYQQEAV DGFWDGGSGV VVLPCGAGKT LVGAAAMAKA QATTLILVTN TVSGRQWKRE
LIARTSLTEE EIGEYSGERK EIRPVTIATY QVMTRKSGGQ YRHLDLFDSR DWGLVIYDEV
HLLPAPVFRM TADLQSRRRL GLTATLVRED GREGDVFSLI GPKRYDAPWK DIESQGWIAP
AECTEVRVTL TDHERLTYAT AEPEERYKIA STARTKLPVV RTVLDRHPGE PTLVIGAYLD
QLEELGEELQ APIIQGSTRN AERERLFDAF RAGEIKTLVV SKVANFSIDL PDATVAIQVS
GTFGSRQEEA QRLGRLLRPK GDGRQAHFYS IVSRDTLDTD YAAHRQRFLA EQGYAYRIVD
ADDLLGPAIP GGEE
|
|---|
| |