Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4792 |
Symbol | |
ID | 8450422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5329362 |
End bp | 5331050 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645043832 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003204057 |
Protein GI | 258654901 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCG CCGACATGAC GACACCGGGG ACGCCCCCCC GCCGCGCCAC CACCGCGGAC TGGGTCGGCC TGTCGGTGCT GGCCCTGGCC TGCCTGATGT ACGTGATGGA CCTGACCGTG CTGCACCTGG CGATCCCGCA GATCAGCGAG CAGCTGGCGC CGTCCAGCGC GCAGCTGCTG TGGATCATCG ACGTGTACGG GTTCCTGGTG GCCGGGGCGC TGGTCACGAT GGGCACCCTG GGTGACCGGA TCGGCCGGCG CAAGCTCCTG CTGATCGGCG CCGCCGCCTT CGGCCTGACC TCGATCCTGG CCGCGTTCTC CACCACTCCG GAGATGCTGA TCGTCTCCCG CGCCCTGCTC GGCCTGGCCG GGGCGACCCT GGCCCCGTCG ACGCTGTCGC TGATCTTCCA CATGTTCGCC GACCCGCGGC AGCGGTCGGT CGCGATCGGC ATCTGGATCG GTGCGTTCTC GGCCGGCAGC GCGGTCGGCC CGGTGCTCGG TGGTCTGGTC CTGGAGCACT TCTGGTGGGG CGCGGTGTTC CTGCTGGCCT TGCCGGTGAT GGTGGCGCTG TTGATTCTGG GGCCCATCGT GCTGCCGGAA TACAAGGATC CGGGGGCCGG CCGGCTCGAC CTGCTCAGCG TCCTCATGTC GGTGGCGGCC GTCCTGGCGA TGATCTTCGG GCTCAAGGAG ATCGCCCAGG ACGGCGTGAC CCCGCTGCCG GTCGGGCTGA TCGTCGGCGG GCTGGTGATC GGCCTGATCT GGATCCGCCG GCAGCGGCGG CTGACCGACC CGATGATCGA CGTCAGCCTG TTCCGCATCG GCTCGTTCCG CACGGCGCTG AGCGTGAACT TCCTGGCCGT GTTCATCTCG GTGGGCTACT TCCTGTTCCT GGCCCAGTAT CTGCAGCTGA TCGTCGGCCT GTCCCCGTTG CAGTCCGGCC TGTGGTCGCT GCCCTCGGCG GCCGGGTTCA TCGTCGGCTC CCAGCTGGGC CCGCGCATCG TTCGCCGGGT GCAGCCCGCG ACGATCATCG CGACCGGGCT GGGGCTGTCC GCGGTCGGTC TGGGCCTGCT GACCCAGGTC GGGGTCACCG ACGGGCTGTG GATCATCGTG ACCTCCTCGG TGATCATCTC GGTCGGCCTG GGCCCGGTGT TCGGGCTGAC CACCGAGCTC ATCGTGGGCA CCGCCCCGCC GGAGAAGGCC GGGGCGGCCT CCGGCATCTC GGAGACCGCG GCCGAGTTGG GCGGGGCCCT GGGCATCGCG ATCCTGGGCA GCGTCGGCGT CGCGATCTAC CGCGGGCAGC TGGCCACGAC GCTGCCGGCC GGACTGCCGT CCGCCGCGGC GGACGCGGCC AGCGACACCC TGGGTGGCGC CGTGGTCGCG GCCGCATCCC TGCCGCCGGC GCAGGGTGTC GCGGTGGTCG ACGCGGCGGC CACCGCGTTC GTCACCGGCC TGCAGGTGGT CAGCGCGGTG GCCACGGTGA TCGCGGTGAT CATCGCGGTG GTGTCCTGGT TCGCGCTGCG GCAGCCCCGG CCGGCGGCCG GCGGCGACCC GGCCGCCGAT GGCGGTGCGA GTTCCGGCGA CGCGGCGGCC GCGGATGCGG TCGGTCGCGA GGCGGAGCGG CCGCCCGCGC CGGCCCACCC GTCGCCGCGC AGCGGGCCGG ACGATCGGCT CTGTTGCGCC GACTGCTGA
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Protein sequence | MTSADMTTPG TPPRRATTAD WVGLSVLALA CLMYVMDLTV LHLAIPQISE QLAPSSAQLL WIIDVYGFLV AGALVTMGTL GDRIGRRKLL LIGAAAFGLT SILAAFSTTP EMLIVSRALL GLAGATLAPS TLSLIFHMFA DPRQRSVAIG IWIGAFSAGS AVGPVLGGLV LEHFWWGAVF LLALPVMVAL LILGPIVLPE YKDPGAGRLD LLSVLMSVAA VLAMIFGLKE IAQDGVTPLP VGLIVGGLVI GLIWIRRQRR LTDPMIDVSL FRIGSFRTAL SVNFLAVFIS VGYFLFLAQY LQLIVGLSPL QSGLWSLPSA AGFIVGSQLG PRIVRRVQPA TIIATGLGLS AVGLGLLTQV GVTDGLWIIV TSSVIISVGL GPVFGLTTEL IVGTAPPEKA GAASGISETA AELGGALGIA ILGSVGVAIY RGQLATTLPA GLPSAAADAA SDTLGGAVVA AASLPPAQGV AVVDAAATAF VTGLQVVSAV ATVIAVIIAV VSWFALRQPR PAAGGDPAAD GGASSGDAAA ADAVGREAER PPAPAHPSPR SGPDDRLCCA DC
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