| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4782 |
|---|
| Symbol | |
|---|
| ID | 8450412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5317402 |
|---|
| End bp | 5318508 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645043822 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_003204047 |
|---|
| Protein GI | 258654891 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAT CGACCGAATC CCCCCGAACG GCGTTCGCCG GAGCGAACGC GGCCGCCGGG
CCGGCTCGGC TCCGCGTGGT CGCCTCTACC CCGATCAGCG AAGAGCTGAT CGCCGAGATC
GTGGCGGCCG AACCCCGCAT CGACTTCATC CGTGATCAGA GCCTGCTCGC GCCGCAGCGC
TTTCCCGGTG ACCACAGCGG CGACCCCGCG TTCACCCGCA CCTCGCCGCA GCAGGCCGCG
TTCGACGCCC TGGTGGACTC CGCCCAGGTG CTCTACGGCG TGCCCGACGA GAAGCCGCCG
GCCCTGGCCC GCACGGTCGC GGCTAACCCC GGCCTGCGCT GGGTACACAC CATGCCGGCC
GGCGGCGGCG CCCAGGTCAA GGCGGCCGGG CTGCCGGGAG AGGCGCTGGA ACGGATCGCG
TTCAGCACCT CGGCCGGGGT GCACGCCGAA CCGCTCGCCG AGTACGCCGT GTTCGGCCTG
CTGGCCGGCG CCAAGACGCT GCCCCGGTTG CGCCAGCAGC AGCAGGACAA GCGGTGGTCC
GGCCGCTGGG AGATGGGCCT GCTGTCCCAG CAGAAGATCC TGCTGGTCGG TCTGGGCAGC
ATCGGCCGGG CCACCGCGGC CAAGCTCAGC GCGCTGGGCG CGACCGTGAT CGGCACCAGC
CGGCACCCCG ACCCGGTCGC CGGCGTGGAC ACCGTCATCC ATCCGGATGA CCTGCTCGAC
GTGGTGGGTG GGGTCGACGG CATCGTGGTC AGCCTGCCCG GCACCGCGGC CACCGAGGGG
CTGCTGGGCC GGGACGTGTT CGCCAAGGTC AAGCCGGGGG TCACCGTGGT CAGCATCGGC
CGGGGCACCG TCATCGACGA ACCGGCGATG GTGCAGGCAC TGGCCGACGG ACGGATCGGT
TTCGCCGCGC TCGACGTGTT CGCGGTCGAA CCGCTGCCCG CCGACAGCCC GTTGTGGACC
GACCCCAAGG TGCTGATCAG CCCGCATACG GCGGCCCTGA ACTCGGCCGA GGATCGGCTC
ATCGCCAGGC TTTTCGCGCG GAACGCGTCC CGATTCCTGG ATGGTCGCGA GCTGATCAAC
CGGGTCAACA CCGTCGAGTT CTACTGA
|
|---|
| Protein sequence | MTSSTESPRT AFAGANAAAG PARLRVVAST PISEELIAEI VAAEPRIDFI RDQSLLAPQR
FPGDHSGDPA FTRTSPQQAA FDALVDSAQV LYGVPDEKPP ALARTVAANP GLRWVHTMPA
GGGAQVKAAG LPGEALERIA FSTSAGVHAE PLAEYAVFGL LAGAKTLPRL RQQQQDKRWS
GRWEMGLLSQ QKILLVGLGS IGRATAAKLS ALGATVIGTS RHPDPVAGVD TVIHPDDLLD
VVGGVDGIVV SLPGTAATEG LLGRDVFAKV KPGVTVVSIG RGTVIDEPAM VQALADGRIG
FAALDVFAVE PLPADSPLWT DPKVLISPHT AALNSAEDRL IARLFARNAS RFLDGRELIN
RVNTVEFY
|
|---|
| |