Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4724 |
Symbol | |
ID | 8450354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5260251 |
End bp | 5261072 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645043764 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003203989 |
Protein GI | 258654833 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCT CCGCACAGGC CGCCGGTACC GCCGGATTCG GATCCAAGCT GGCCGGTCGG GTCGCCCTGG TGACCGGCGG CACCCGCGGC ATCGGCGCGG CGATCAGCCG CAGCCTGGCC AACCAGGGCG CCACTGTCGC CGCCGGCTAC GGCCGGGACG CCGAGCACGC CCAGGAGTTC CTGGCCCAGA TCCGGGCCGA GGGGGTCAAC GGTTCCATCC ACCAGGGCAA CATCGGCGTC GGTGACGACT GCCGGCGGGT GGTCCGGGAG GTCGTCGAGC AGCACGGCTC GCTGGACATC CTGATCAACA ACGCCGGCAT CACCATCGAC AGGACGGTGT TGAACCTGAC CGACTCGGAC TGGGAGAAGG TGCTGGCGGT CAACCTCTCC GGGGCCTTCT TCCTGTCCCA GGAAGCGCTC AAGGGCATGG TCGAGCGGGG TACCGGCCGG ATCATCAACG TCTCCTCGAT CATCGGCGAG GTCGGCAACA TCGGGCAGGC CAACTACGCC GCGTCCAAGT CCGGCCTGTT CGGCCTGACC AAGACGTTGG CCCGGGAGGC CGCCTTCATG CTGCACAAGT CCGGCAAGCT GGAGGGCAAC CCGATCGGCA TCACGGTCAA CACGATCACC CCCGGCTACG TGGAGACCGA GATGATCGGC ACGGTGCCGC AGAAGGTGAT CGACGCGATC AAGGACAAGA TCCCGATGCG CCGCTTCGCC CGGCCCGAGG AGATCGCCCG GGTGGTGCAC TTCCTGGCCG CCGACACCTC CGGTTACATC ACCGGTCAGG TGTGGGGCGT CAACGGCGGC ATGGACATGT GA
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Protein sequence | MTASAQAAGT AGFGSKLAGR VALVTGGTRG IGAAISRSLA NQGATVAAGY GRDAEHAQEF LAQIRAEGVN GSIHQGNIGV GDDCRRVVRE VVEQHGSLDI LINNAGITID RTVLNLTDSD WEKVLAVNLS GAFFLSQEAL KGMVERGTGR IINVSSIIGE VGNIGQANYA ASKSGLFGLT KTLAREAAFM LHKSGKLEGN PIGITVNTIT PGYVETEMIG TVPQKVIDAI KDKIPMRRFA RPEEIARVVH FLAADTSGYI TGQVWGVNGG MDM
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