| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4624 |
|---|
| Symbol | |
|---|
| ID | 8450252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5147641 |
|---|
| End bp | 5150211 |
|---|
| Gene Length | 2571 bp |
|---|
| Protein Length | 856 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645043665 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003203892 |
|---|
| Protein GI | 258654736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.21401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCGAT CAGACCTCGA GGGGAATATT CAGAATGCGA TCGCTTCGAA AGCCCCGCTG
ATTTGGGTGA CAGGGGACGC CGGAACGGGC AAGACAAGCG TCGTCCAACA CCTACTGGCA
GCAGTCTCGA ACTCGGTCAC CATCAGAGCA CACACGCCCG CGCTTCTACA TGACGACTTG
GCAATCGCGC TGGAGCAGTC CAGCCTATCA TCTGAGGGTC ATCTCGCTGC GCTAGCTCTG
CGCCTTGCCA AGTCTTTAGT CCCGCTCAGA CGTTCAATCA TTGTTTACGT TGATAACGCC
AATGACCTTA CAGTGTCCGG TCAAGTCATC GAGGTGATGC TCGATTCCGG CATCCAGGTG
ATCGCGACGA GCCAGACGCG GAGTCCTTTC CCGAATGCAG CAACCGTCGA CGTCCACGAC
ATGTCTGTAA CCGAAGCAGT GGCGCTAGTA ATATCCATAG TCCCGGAATG TACCGAAGTC
GTGGCGCTCG CAGTTGCTAC CACGCTGTAT TGTCGACCGC TCGCGATCGA CCACGCTTGC
CGCGCTGCAG TTCAATACGG ACTCGAAATT CGTCGGTTCT GCACAGAGAT CAGAAGCGAC
GCCGATCTAG CAAAGGCGCT CGAATTGAGC GCACCCGCGC CTGAGGTAGC CCTCACGGCA
GTTTACCGAC GAGTCCTGAA CCGCCTTGCC GCCCAGCAGG ATACGCATTT GTTGTTAGAG
ATAATTGTTC ACACTGAATT CTATATAGCC GCGGAACCGC TCGATAGAGT CTGGCTTGCC
GCTCGGAATG AATCGCCCGT AGCACCCGCG GCGAGTGACA CGTTGGCAGA TGACATCGCT
GCCCAAGTTC GCTGGGGAGC AACAATCATT GCGCCGGCGC CGTCGTCGGA ATCGCCTCGG
ATGCCCCTGT TATCGCAGCT CGCACTGCGG CAGGCAATCA ATGTTCTTAC AAACCTCAAC
TTGGTTCACT TCCGCCAAAA CGTCTATATG ATTCACGACC TGACTCGGGC AGTTCTGCGC
AGCTTAACAC CGGTCAATCG TCACGCCGTT GCACGTGCGA TCGGCAACGC CATTCTCGGT
GAAGTGAAGG AGTGGTACTG GGTGCCCGGC GACCCGCTCC CGGCGAAAAT CGCCTTGCAA
GCGGTTCAAA TCGGGTTCGC TCTCCAAGCA ATAGCTGAGG AACCCCCGGA GACCACTGCT
GAGCTCGACA CCCACGAGTT TTTGACCGCC GTAGCATTGC GATCATTCCG TCAGCTCGGG
GACAACCTCG CCGGAACCGC CGATATTGTC GATACGAATC TGCAGGCCCA GCAACGCTTC
AACAGCTCCG AAATCCGCCC CGGGCTCAGA GCAATGTCAA TTGAGTGCTT TGCCCGTGGC
TGGGTCACTC AATCTTTTAG GCCTCGGATG GATTCTAGCT ACTTCGACGT GATTAAGGTG
AACGCTGAGG AAGCTGATGC GATTCGTGGG TTCTCATCGA GCGGATGGGA CAATCTCCAT
GCCGAGGTCG ATTACACAAC TATGACACGG ACCGCAGAGT CGGTCAAGCT ACACCTGAAC
ACGCACGACC TGCGGCGCCA TTCTTTCGAT GATTTGATAC GGCTTGCGAA ACGATCGGCC
GTAATCGGTA TGTGCGAAAT CAGTACAGGG AGAACCCTGC AAGGCGTGTC TACTCTGCGC
GAATGTATCG AAAGGTTCCG CACAATAGGC TGCTTGCCAG CGTCGGCCGC TTGGGGCATG
CGCTGCACAA TTGCCGCCGT TCAGGGCTCC CTACGCGCAG GCCGGCTAGA TCTCGTGGAC
GAACTGCTTC GCGACAACCT GGCGAAATTC ATGGCATGGT ACGACTTGCG CCTGGGCGTA
AGCCCAAGGA GATTCCGGTT GTTGGATATA CCGATGTTCG AGAGAGTCCG CGCCATACTT
CGGGAGTACA ACATCGCGAA ACACTTGTAC GACCCGCAAT ACGGCCAATA CGTCATCGAT
GAGGAATTGA GGCGAACGAT GGTCGACTGC GAGCGTTGGG CGACCTCGGT GGAAGGTGGC
CTGTCCTTCG ATTTTGGTGA GCAGCGGTCT CGCCTCTTTC CATTTTCGTC GATTGACGAT
GTGCCGGAGC ATCAGGTCGG CGAAATGCAT CAATTTGAAA AGAGCCTTGC CGAGTCGAAG
CATTCCACAT TTGGGATCAG TCAAATTGCG CTGAATTCCC TCGTGGGCTT TGTGTTGATG
TACGTTGACG GTGTAAGGCC GGAAGATTTG GCCCTTTCGA ACTCCGGCCA GGCGAGCGAG
GAAAGCCAAG CAGTTCACGC GATGTTCGAG CGGCCGTGGC TGATGCCGCT GACGGTTCGA
AACATTGCGT GGAAATTTAA ACATGACCAT CATTCTCCAT ATTGGTATGC CCGTTCGATG
GCGATTGCGG CTTGTGCAAG CAATCTGGAT GGCGTCAGGG CCGGTTTGAG GAGGAGGCTA
GTCGCCGAGG GTCGAAGAGT CTCAGGACGA CTAGGCCGAA AAGACTGGCT GCAGGCGATC
GACGCTTCGG TTGGATCTCA GCCAGAGCTT CGTTGTTTTG TTGCGATTTG A
|
|---|
| Protein sequence | MSRSDLEGNI QNAIASKAPL IWVTGDAGTG KTSVVQHLLA AVSNSVTIRA HTPALLHDDL
AIALEQSSLS SEGHLAALAL RLAKSLVPLR RSIIVYVDNA NDLTVSGQVI EVMLDSGIQV
IATSQTRSPF PNAATVDVHD MSVTEAVALV ISIVPECTEV VALAVATTLY CRPLAIDHAC
RAAVQYGLEI RRFCTEIRSD ADLAKALELS APAPEVALTA VYRRVLNRLA AQQDTHLLLE
IIVHTEFYIA AEPLDRVWLA ARNESPVAPA ASDTLADDIA AQVRWGATII APAPSSESPR
MPLLSQLALR QAINVLTNLN LVHFRQNVYM IHDLTRAVLR SLTPVNRHAV ARAIGNAILG
EVKEWYWVPG DPLPAKIALQ AVQIGFALQA IAEEPPETTA ELDTHEFLTA VALRSFRQLG
DNLAGTADIV DTNLQAQQRF NSSEIRPGLR AMSIECFARG WVTQSFRPRM DSSYFDVIKV
NAEEADAIRG FSSSGWDNLH AEVDYTTMTR TAESVKLHLN THDLRRHSFD DLIRLAKRSA
VIGMCEISTG RTLQGVSTLR ECIERFRTIG CLPASAAWGM RCTIAAVQGS LRAGRLDLVD
ELLRDNLAKF MAWYDLRLGV SPRRFRLLDI PMFERVRAIL REYNIAKHLY DPQYGQYVID
EELRRTMVDC ERWATSVEGG LSFDFGEQRS RLFPFSSIDD VPEHQVGEMH QFEKSLAESK
HSTFGISQIA LNSLVGFVLM YVDGVRPEDL ALSNSGQASE ESQAVHAMFE RPWLMPLTVR
NIAWKFKHDH HSPYWYARSM AIAACASNLD GVRAGLRRRL VAEGRRVSGR LGRKDWLQAI
DASVGSQPEL RCFVAI
|
|---|
| |