| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4612 |
|---|
| Symbol | |
|---|
| ID | 8450240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5131099 |
|---|
| End bp | 5131689 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645043653 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003203880 |
|---|
| Protein GI | 258654724 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.657053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGCA CCAAGACCTT CGACCCCGCC GAGGTCGTGC GCGCGGCCCG CGCGGTGTTC
TGGACCCGCG GTTTCGAATC GGCATCCCTG CCCGAGCTGC AGGAGGCCAC CGGGCTCAGC
GCGTCGAGCA TTTATCACAG CTTTGGCAGT AAGCGGGGGC TGTTCGACGC CGCGGTGGCC
AGCTATCTCG ACGAGGTCGC CCGCCCGCGG TGGCAGCCGT TGACCGCCCC GCAGGTGCAG
CCGGCTGCGC TGGTCGACTA CCTGGTCGGG CTCCGCACGG CATTGCGCAG CAGCGGGACG
CTGCCGGCGG ATCACGGCTG CCTGCTGCTC AACACGGCAT CCGCGCCGCT GGCCGGCGAC
GACACGGTGG CGCGGGCGGT CGGCGCCTAC TGTGCCGAGC TGCGGGCCGC GATCAGTCGC
GGCGTCGATG CGGCCCGGCC GGAGCTGGAC CCGGCCGCGC GGGCGTGCCT GGCCGATGCC
TGTACCGGGC AGGTCGTGGC TGCGTTCACC CTGATCCGGG TCGACGCCGA GCAGGCCGCG
CGGTGCCTCG ACGCCGCCCT GACGCTGGTC GATCCAGAGC CGGCCGGCTG A
|
|---|
| Protein sequence | MGRTKTFDPA EVVRAARAVF WTRGFESASL PELQEATGLS ASSIYHSFGS KRGLFDAAVA
SYLDEVARPR WQPLTAPQVQ PAALVDYLVG LRTALRSSGT LPADHGCLLL NTASAPLAGD
DTVARAVGAY CAELRAAISR GVDAARPELD PAARACLADA CTGQVVAAFT LIRVDAEQAA
RCLDAALTLV DPEPAG
|
|---|
| |