Gene Namu_4611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4611 
Symbol 
ID8450239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5130324 
End bp5131079 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content69% 
IMG OID645043652 
ProductRare lipoprotein A 
Protein accessionYP_003203879 
Protein GI258654723 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4305] Endoglucanase C-terminal domain/subunit and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.650181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG GAGTTGAACC GATCAATCCG GAGTTCTCGT TGCTGACCGA ATCCACCACG 
CCGCTCGCCG GTGCCCGCCG GCCGCGCCGG CGCACGGCCG TTGCCCTGCT GATCGGGGCC
GTCGCGGCCA CGCTGCTGCT GGCCGCGCCG CCGGCCGCCG CGGCGACCAG CGGCAAGGCC
ACCCACTATG AGGCGACCGG GGGGAGCACG ACGAACGGCA ACTGCTCGTT CCCCGCCCTG
CCGGCCGACA AGCTCTACGT CGCGGTCAGC CCGACCGAGT ACGCCAAGGG TGCGGCCTGC
GGCACCTACC TGGACGTGAC CGGCCCGCGC GGAACGGTCC GCGTCGTGGT CATGGACAAG
TGCCCCGAGT GCGCGACCGG GCACATCGAC CTGAGCAAGA CGGCGTTCGC CAAGATCGGC
GCGCTCAGCG ACGGCATCAT CCCGGTCACC TACAGCACGG TGAAGAACCC GACCGTCCCG
GCACTGAACT TCCGGTTCAA GAACGGCTCC TCCCGGTGGT GGTTCGCGCT GCAGGTGCTC
AACCACGGCA ACCGCCTGCA GTCGGTGTCG GTGCAGGTCA ACGGCAAATG GGTGGCCGCG
ACGCTGGCCG ACTACAACTA CTGGATCTAC CAGCCGGGCG CCGGTCCCGG GCCGTACACG
CTGCTGGTCA AGGACATCTA CGGCCAGCAG GCGATCGTCT CCGGCGTCAC CATGTCGCCG
ACCCTGGTGC AGACCACCAC CGCGCGACTC AAGTAG
 
Protein sequence
MATGVEPINP EFSLLTESTT PLAGARRPRR RTAVALLIGA VAATLLLAAP PAAAATSGKA 
THYEATGGST TNGNCSFPAL PADKLYVAVS PTEYAKGAAC GTYLDVTGPR GTVRVVVMDK
CPECATGHID LSKTAFAKIG ALSDGIIPVT YSTVKNPTVP ALNFRFKNGS SRWWFALQVL
NHGNRLQSVS VQVNGKWVAA TLADYNYWIY QPGAGPGPYT LLVKDIYGQQ AIVSGVTMSP
TLVQTTTARL K