| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4589 |
|---|
| Symbol | |
|---|
| ID | 8450217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5111652 |
|---|
| End bp | 5113133 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645043630 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003203857 |
|---|
| Protein GI | 258654701 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AGCTGATCCC CACCGAGCCG CAACGCTGCA GCCCCGACGA GCTGCGCACC
CTGTTCCTGT TCGAGAAGCT CACCGACGAG CAGCTGGACT GGCTGTGCAC CAACGGCTGG
GTCAAGCTCT TCGAGCCGGG CCCGGTGTAC GCCGAGGGTG ATCCGGCGAC CTGCTTCTAT
GTGCTGATCG AGGGCACCAT CGCGCTGTCC CGGCGGGTCG GCCCGGACGA CGTGGAGACC
ACTCGCACCT CCCAGCCCGG CGTCTACGCC GGCGCCTGGC GTTCCTACCT GGGCGAACGG
GCGCCGGAGA CCTACAACAA CACGATGCGG GCGGTGGCGC CGTCCCGGTT CTTCGTGCTC
GACGCCCCGC TGTTCGCCCA GGCGATGCGG GAGTGGTTCC CGATGGCCGT GCACATGCTG
GAGGGCCTGT TCTACGGCAT CAAGAGCACC AACGACGCGG TCAACCAGCG GGAGCGCCTG
CTCGCGCTGG GCTCGCTGTC GGCCGGCCTG ACCCACGAAC TGAACAACCC CGCGTCGGCG
GCCGTGCGAG CCACCGCGGC GCTGCGGGAA CGGGTCGCCG GCATGCGGCA CAAGCTGGCC
ATCATCTCCA CCGGCAAGTA CGCCATCAAC CTCGAGCCGC TGGTCGCCCT GCAGGAGGAG
GCGGCCGCGC TGGTCGCCAA GGCCCCCACG CTGTCCCCGA TCGAGGTCGG CGACGCCGAG
GACGAGATCG GCGAGTGGCT CGACGAGCGG GAGATCCCCT ATGCCTGGGA CATCGCGCCG
ACGTTCGTGC AGGCCGGCAT CGACGTCGGC TGGCTGGAGA AGGTCAGCGC CACGGTGCCC
GAGGGCACCC TGGACGGCGC CCTGAAGTGG CTGTACTACA CGGTCGAGAC CGAGCTGTTG
ATGAATGAGA TCCACGACGC CACCACCCGG ATCTCCACCC TGGTCGGCGC GGCCAAGCAG
TACTCGCAAC TGGACCGGGC CCCGTTCCAG ACGGTCGATG TGCACGAGCT GCTGGACAGC
ACCCTGACCA TGCTCAGCGC CAAGCTGGCC GGGCTGCAGG TGGTCAAGGA GTACGACCGC
AGCGTGCCCG CGATCCCGGC CTACCCGGCC GAGCTGAACC AGGTGTGGAC CAATCTGATC
GACAACGCGC GGGACGCCAT GGGCGGGCAG GGCACGCTGA CCGTGCGTAC CTCCTCCGAC
GGTGAGTGCC TGACGGTGGA GATCGGCGAC ACCGGACCCG GCATCCCACC GGAGATCCAG
GGCCGGATCT TCGAGCAGTT CTTCACCACC AAGCCGGTCG GCGAGGGCAC CGGACTTGGC
CTGGACATCT CCTGGCGGAT CGTGGTCAAC AAGCATCACG GGGACCTGAC CGTGCTCTCG
GTGCCCGGAG ACACCCGGTT CCGGGTCCGG CTGCCGCTGA CCGGGCCGCA GGACAGCGCG
ACCGCGCTGG CCGGCGCGGC CGACGAGCCG ACCGATTCGT GA
|
|---|
| Protein sequence | MSEQLIPTEP QRCSPDELRT LFLFEKLTDE QLDWLCTNGW VKLFEPGPVY AEGDPATCFY
VLIEGTIALS RRVGPDDVET TRTSQPGVYA GAWRSYLGER APETYNNTMR AVAPSRFFVL
DAPLFAQAMR EWFPMAVHML EGLFYGIKST NDAVNQRERL LALGSLSAGL THELNNPASA
AVRATAALRE RVAGMRHKLA IISTGKYAIN LEPLVALQEE AAALVAKAPT LSPIEVGDAE
DEIGEWLDER EIPYAWDIAP TFVQAGIDVG WLEKVSATVP EGTLDGALKW LYYTVETELL
MNEIHDATTR ISTLVGAAKQ YSQLDRAPFQ TVDVHELLDS TLTMLSAKLA GLQVVKEYDR
SVPAIPAYPA ELNQVWTNLI DNARDAMGGQ GTLTVRTSSD GECLTVEIGD TGPGIPPEIQ
GRIFEQFFTT KPVGEGTGLG LDISWRIVVN KHHGDLTVLS VPGDTRFRVR LPLTGPQDSA
TALAGAADEP TDS
|
|---|
| |