| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4564 |
|---|
| Symbol | |
|---|
| ID | 8450192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5081831 |
|---|
| End bp | 5082682 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645043605 |
|---|
| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
|---|
| Protein accession | YP_003203832 |
|---|
| Protein GI | 258654676 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGTG GTGTGAGGCC CGGGGGCCTG GTGCTGGCCG GCACACCGCT GGGTCGGCCG
GAGGACGCGT CGCCGCGGTT GCGGGACGCG CTGGCCGGCG CCGACGTGAT CGCGGCCGAG
GACACCCGAC GGTTCCGCCG ATTGGCCGCC GATCTGGACG TCGCGGTGTC CGGATCGCTG
GTGTCCTATT ACGAAGCGGT GGAGCGGGCC CGCATTCCCG GGCTGCTGGA GCGGATGCAG
GAGGGGCAGA CCGTCGTGCT GGTCACCGAC GCCGGCATGC CGTCGGTGTC CGACCCCGGC
TACCGGCTGG TCGCCGCGAC CGCGGACGCC GGCCTGCCCA TCACCTGCGT GCCCGGGCCG
TCGGCGGTGA TCACCGCGCT GGCCCTGTCC GGGCTGCCCT CGGACCGGTT CTGCTTCGAG
GGGTTCCTGC CACGCAAGAG CGGCGAGCGG GCCCGGGCGC TGGCCGACCT GGCCACCGAG
CGCCGCACCA TGGTGTTCTT CGAGTCGGTG CACCGCATCG GCGACGCGCT GGCCGCGCTG
GGCCGGGCGT TCGGGCCGGA CCGTCCGGCG GCGCTGTGTC GGGAGCTGAC CAAGACCTAC
GAGCAGGTCA TCCGGGGCAC CCTGGCCGAC CTGGTGACCG CGGCCGACGG CGGGCTGCGC
GGGGAGATCA CCCTGGTGGT CGGCGGGGCC CCGGTCATCG CCCAGGCGCC GCCCGACGAG
GCGGAGCTGG CCGGTCTCGT CCAGGATCTG GTGACCGCCG GCCGGACCCG GCGGGACGCC
GTCGACGAGA TCGCGGCCAG ACTGGGCCTG CCCCGCCGCG CGGTCTATGC CGCGGCGGTG
GCCACCCGCT AG
|
|---|
| Protein sequence | MTGGVRPGGL VLAGTPLGRP EDASPRLRDA LAGADVIAAE DTRRFRRLAA DLDVAVSGSL
VSYYEAVERA RIPGLLERMQ EGQTVVLVTD AGMPSVSDPG YRLVAATADA GLPITCVPGP
SAVITALALS GLPSDRFCFE GFLPRKSGER ARALADLATE RRTMVFFESV HRIGDALAAL
GRAFGPDRPA ALCRELTKTY EQVIRGTLAD LVTAADGGLR GEITLVVGGA PVIAQAPPDE
AELAGLVQDL VTAGRTRRDA VDEIAARLGL PRRAVYAAAV ATR
|
|---|
| |