| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4561 |
|---|
| Symbol | |
|---|
| ID | 8450189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5077751 |
|---|
| End bp | 5079586 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645043602 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_003203829 |
|---|
| Protein GI | 258654673 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CCGTTCTGAC CGCGGTGGCC TGGCCGTACG CCAACGGGCC CCGGCACATC
GGCCACGTTT CCGGCTTCGG GGTTCCCGCC GACGTCTTCT CCCGGTACCA GCGGATGGCC
GGCAACGACG TGCTGATGGT CTCCGGCACC GACGAGCACG GCACCCCGAT CCTGGTGCAG
GCCGACCAGG AGGGCGTGAG CGCCCGGGAG CTGGCCGACC GGTACAACCG GGTCATCGTG
GAGGACCTGC ACGGGCTGGG CCTGAGCTAC GACCTGTTCA CCCGCACCTC CACCCGCAAC
CACTACGCGG TCGTGCAGGA GCTGTTCCGG ACGGTCCACC GCAACGGCTA CTTCGTCGCC
AAGACCACGA TGTCGGCCAT CTCCCCGTCC ACCGGCCGCA CCCTGCCCGA CCGGTACATC
GAGGGCACCT GCCCGATCTG CGGCTACGAC GGGGCCCGCG GCGACCAGTG CGACAACTGC
GGCAACCAGC TCGATCCCAT CGACCTGATC AACCCGCGTT CGCGGATCAA CGGTGAGACG
CCGGTTTTCA CCGAGTCCGA GCACTTCTTC CTGGACCTGC CGGCGCTGGC CGACGCCCTG
GGCGGGTGGC TGCGCACCCG CACCGACTGG CGCCCGAACG TGCTGCGGTT CTCGTTGAAC
CTGCTCGACG ACCTCAAGCC GCGGGCGATG ACGCGCGACA TCGACTGGGG CATCCCGGTG
CCGTTGGACG GCTGGCGGGA CCGGCCGGAC AAGAAGCTGT ACGTCTGGTT CGACGCCGTC
ATCGGGTACC TGTCCGCGTC GATCGAGTGG GCCCGCCGGT TCGGCAAGAA CGGCGAACCG
GATCCCGACG CCTGGCAGCG CTGGTGGCAC GGGGGCGACG AGCAGGCCCG CGCCTATTAC
TTCATGGGCA AGGACAACAT CACCTTCCAC TCGCAGATCT GGCCGGCCGA GCTGCTGGCC
TACGACGGGC GGGGCGAGCA CGGCGGATCC GCGGGCTCGT TCGGCACGCT CAACCTGCCC
ACCGAGGTGG TGTCCAGCGA GTTCCTGACC ATGAGCGGTT CGAAGTTCTC CACCTCGCGG
CGCACCGTGA TCTACGTCGG TGATTTCCTG CGCGAGTTCG GCCCCGACTC GCTGCGTTAC
TTCATCGCCG CGGCCGGGCC GGAGAACCAG GACGCCGACT TCACCTGGGA AGAGTTCGTG
CGGCGCAACA ACTTCGAGCT GGCCAACGAG TGGGGCAACC TGGTCAACCG GTCGGTATCG
ATGGCGCACA AGAACTTCGG CGGCATCCCG GCGGGCACGG CCCGCACCGA CGCCGACGTC
GAGCTGCTCC GGGCGTCCGA GGCGGCCTTC GCCACTGTCG GGGACCTGTT GTCCCGCAGC
CGGTTCAAGG CGGCCTCGGC CGAGGCGATG CGGGTGGTCG GGCTGGCCAA CAAGTACATC
TCCGAATCCG AGCCGTGGAA GCTCAAGGAC GATCCGGAGC GGCAGGGCAC CGTCCTGCAC
ACCGCGCTGC AGGTCGTGGA CGACGCGAAA ACGCTGCTGA CGCCGTTCCT TCCGCATTCC
TCGCAGGCCG TGTTCGAGGC GCTGGGCGGG GCGGGTGTGT GGGCCGCGCA GCCGGAGATC
CGGATGGTCA CCGACTTCGA CGACGACGTC GAGGGAGTCG GGGTGCCCGA GGTGGTGGAC
TACCCGGTGC TGACCGGTGA CTACGCCCAC GAGCAGGCCG TCTGGGCCCG CCGGGACATC
GAGGTCGGCC GGCCGCTGAG CAAGCCCACC CCGCTGTTCA CCAAGCTCGA TCCCGGCCTG
GGCGAGACCG GTCCCGAGTG GGCGCCCGTC ACATGA
|
|---|
| Protein sequence | MSTPVLTAVA WPYANGPRHI GHVSGFGVPA DVFSRYQRMA GNDVLMVSGT DEHGTPILVQ
ADQEGVSARE LADRYNRVIV EDLHGLGLSY DLFTRTSTRN HYAVVQELFR TVHRNGYFVA
KTTMSAISPS TGRTLPDRYI EGTCPICGYD GARGDQCDNC GNQLDPIDLI NPRSRINGET
PVFTESEHFF LDLPALADAL GGWLRTRTDW RPNVLRFSLN LLDDLKPRAM TRDIDWGIPV
PLDGWRDRPD KKLYVWFDAV IGYLSASIEW ARRFGKNGEP DPDAWQRWWH GGDEQARAYY
FMGKDNITFH SQIWPAELLA YDGRGEHGGS AGSFGTLNLP TEVVSSEFLT MSGSKFSTSR
RTVIYVGDFL REFGPDSLRY FIAAAGPENQ DADFTWEEFV RRNNFELANE WGNLVNRSVS
MAHKNFGGIP AGTARTDADV ELLRASEAAF ATVGDLLSRS RFKAASAEAM RVVGLANKYI
SESEPWKLKD DPERQGTVLH TALQVVDDAK TLLTPFLPHS SQAVFEALGG AGVWAAQPEI
RMVTDFDDDV EGVGVPEVVD YPVLTGDYAH EQAVWARRDI EVGRPLSKPT PLFTKLDPGL
GETGPEWAPV T
|
|---|
| |