Gene Namu_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4560 
Symbol 
ID8450188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5076912 
End bp5077754 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content74% 
IMG OID645043601 
Producthydrolase, TatD family 
Protein accessionYP_003203828 
Protein GI258654672 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG AGCCGCATCC CGCGGTGGCG GGTCGGCCCC TCGCGTCCCC GCCGGAGCCG 
TTGCCGGCCC CGGTCACCGA CGCGCACACC CACCTGGACG CCTGCGGCTG CCGCGACGAG
CACGATGTCG CCGAGGCGAT GGCCCGGGCC GCCGCGGTCG GCGTGACCCG GGTGGTCACC
GTCGCCGACG ATCTGGCCGC CGCCCGCTGG GCCGTGCAGG CCGCCCAATG GCATCCGGAG
CTGTATGCCG CGGTCGCGCT GCATCCCACC CGGGCGGACA CCCTGGACGA CGCCGCCCGC
CGCGAGATCG AGACGCTCGC CATCGACCCG CGGGTGGTGG CGATCGGCGA GACCGGCCTG
GACCACTACT GGGACGCCGC CCCGCACGCG GTCCAGGACG AGGCGTTCGC CTGGCACATC
GACCTGGCCA AGCGGGTGGG CAAGCCGGTG ATGATCCACG ACCGGGACGC GCACGAGGAC
GTGCTGGCCG TCCTGAACCG CGAGGGTGCG CCGGATGCGG TGATCTTCCA CTGCTTCTCC
GGGGACGAGG CGATGGCCCG GCTGTGCGCC GACGCCGGCT ACTACCTCTC GTTCGCCGGT
CCGGTCAGTT TTCGCAATGC GCGCGAGCTG GCCGCCGCCG CGCAGATCGT GCCCGCCGAT
CGGCTCCTGG TGGAGACCGA CGCCCCGTTC CTCACCCCGC ATCCGCACCG CGGCAAGCGC
AACGAGCCGT TCGCCCTGCC GTACACGGTG CGGGCCCTGG CCCAGCTGCG CGGGCAGGAT
GTGCTCGAGC TGTGCGACCA GGTCCGCGCG AACGCCCAGG CGGTGTTCGG CTTCCCCGGG
TGA
 
Protein sequence
MTGEPHPAVA GRPLASPPEP LPAPVTDAHT HLDACGCRDE HDVAEAMARA AAVGVTRVVT 
VADDLAAARW AVQAAQWHPE LYAAVALHPT RADTLDDAAR REIETLAIDP RVVAIGETGL
DHYWDAAPHA VQDEAFAWHI DLAKRVGKPV MIHDRDAHED VLAVLNREGA PDAVIFHCFS
GDEAMARLCA DAGYYLSFAG PVSFRNAREL AAAAQIVPAD RLLVETDAPF LTPHPHRGKR
NEPFALPYTV RALAQLRGQD VLELCDQVRA NAQAVFGFPG