| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4558 |
|---|
| Symbol | |
|---|
| ID | 8450186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5073329 |
|---|
| End bp | 5074615 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645043599 |
|---|
| Product | Transglycosylase domain protein |
|---|
| Protein accession | YP_003203826 |
|---|
| Protein GI | 258654670 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3583] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTGCCA CCGATAACTC GACCGACATC TTCGAGCCGA CCACCGAGTC CGCCGAGACC
GAAACCTCCA CCACCGCGGT GAAGACCGGC CGCAGCCTGC GCAAGCCGGC GCTCGTCGGC
GCCGCGGCGC TCGTCGTGGC CCTGGTGGCC GGCGGCAGCA TTGCCCTGGC CGCCCACAAG
GACGTCACGG TCACCGTCGA CGGCCAGGCC CAGGAGGTCG GCACCTTCTC CGGCTCCGTC
GAGGGCGCCC TGGGCGCCGC CGGCGTCACC GTCGGCGAGC ACGACACCGT CGCTCCGGCG
CTGGACACCG CGATCTCCGA TGGCTCGCAG ATCGTCGTCG AGCACGGTCG CCTGCTGACC
CTGACCATCG ACGGGCAGAC CCGCGAGGTC TGGACCACCG CGAGCACCGT CGAGGAGGCG
CTGGCCGAGC TGGGCCAGGA TCCCTCGGCC TACAAGCTCT CCGCCGACCG GTCCCGCGAG
ATCCCGCTGG ACGGCCTCGC CGTCACCGCC GACACCCTTT TCAGCGCCAC CGTTTCCGAC
GGTGCCGCGG CGGCCGCTCC GATCACCTCC GCGGCCAAGA CCGTCGGCGA TCTGCTGGCC
GAGCAGAGCA TCGTGCTGGG CCCGCTGGAC ACCGTGAGCC CCGACGCCTC CACCCCGCTG
AGCAACGGCC TGGTCGTCGC GGTCACCCGG GTCGCCAAGA CCACCGTGAC CGAGGACGTC
GCCGTGGCCC AGCCGGCCGA CCAGACCGTC GAGGACAGCT CGGTCGAGCG CGGCGTCAGC
ACCGTGACCC AGCAGGGTTC GGCCGGTACC GACTCGGTGA CCTACGAGGT GACCACCACC
AACGGGGCCG AGAGCGCCAA GACCGAGGTC TCGCGGACCA CCGTGACCCC GGCCCAGGCC
ACCGTCATCA CCGTCGGCAC CAAGAAGCCG GTCTCCACCT CCTCCGCCAG CACCGGCTCG
TCCTCGGGCA GCTCGTCCTC GAGCAGCTCG AACTCGGGCA GCTCCTCCTC GAGCAGCTCC
AGCGCGGCCC CGGTGTCCTC CTCCGGCTCC AGTGGCATCA ACTGGGAGGG CATCGCCCAG
TGCGAGTCGA CCGGCAACTG GTCGATCAAC ACCGGTAACG GCTACTACGG CGGCCTGCAG
TTCGACAACT CCACCTGGGC CAGCGGCGGC GGCACCGCCT ACGCCCCGCG CGCCGACCTG
GCCACCAAGG AGCAGCAGAT CGCCGTGGCC GAGAACGTCG CGGCCAGCCG TGGCTCCTCG
CCGTGGGCCT GCGCCTACGC CGGCTGA
|
|---|
| Protein sequence | MTATDNSTDI FEPTTESAET ETSTTAVKTG RSLRKPALVG AAALVVALVA GGSIALAAHK
DVTVTVDGQA QEVGTFSGSV EGALGAAGVT VGEHDTVAPA LDTAISDGSQ IVVEHGRLLT
LTIDGQTREV WTTASTVEEA LAELGQDPSA YKLSADRSRE IPLDGLAVTA DTLFSATVSD
GAAAAAPITS AAKTVGDLLA EQSIVLGPLD TVSPDASTPL SNGLVVAVTR VAKTTVTEDV
AVAQPADQTV EDSSVERGVS TVTQQGSAGT DSVTYEVTTT NGAESAKTEV SRTTVTPAQA
TVITVGTKKP VSTSSASTGS SSGSSSSSSS NSGSSSSSSS SAAPVSSSGS SGINWEGIAQ
CESTGNWSIN TGNGYYGGLQ FDNSTWASGG GTAYAPRADL ATKEQQIAVA ENVAASRGSS
PWACAYAG
|
|---|
| |