Gene Namu_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4549 
Symbol 
ID8450177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5062220 
End bp5062843 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID645043590 
Productribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 
Protein accessionYP_003203817 
Protein GI258654661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGG TTCGCCTCAT CGCCGAGACC CGTACTGAGT TCGGTAAGGG CTTCGCCCGC 
CGCATCCGCC GCGCCGGCAA GGTTCCCGCC GTGCTGTACG GCCACGGCAC CGACCCGCGT
CACCTGTCCC TGACGGCGCG GGAGTTCGCC GCCGCCATCA AGGGCGGCGC CAACACCGTG
CTCACCCTGC AGCTGGAGGG CGGCGACGAG CTGGCCCTGC CCAAGTCGGT CGTCCGGCAC
CCGTTGCGCG ACTACTTCGA GCACGTCGAC CTGCTGCTGG TCCGTCGCGG CGAGAAGGTC
ACCGTCGAGG TCCCCGTCAT CGTCGAGGGC GACGCGGAGT CCGGCACTCT GGTGCTCAAC
GACCTGACCA CGCTGTCCAT CGAGGTCGAG GCCCTGAGCA TCCCCGACAG CCTGTCGGTG
GACCTGACCG GCGCCGTCGC CGGCACCCAG ATCCTGGCCG GCGACGTCAC CCTGCCCGCC
GGCGCCTCGC TGATCACCGA CGCGGAGGCC CTGGTGGTCG CCGTGACCGT CGCGCCGACG
GCCGAGCAGC TCGACGCCGA GACCGAAGAG GCTGAGGCCG AGGCCGGCGT CGTCCGGGAC
GAGCCGCAGG CCGAGTCCAA CTGA
 
Protein sequence
MSEVRLIAET RTEFGKGFAR RIRRAGKVPA VLYGHGTDPR HLSLTAREFA AAIKGGANTV 
LTLQLEGGDE LALPKSVVRH PLRDYFEHVD LLLVRRGEKV TVEVPVIVEG DAESGTLVLN
DLTTLSIEVE ALSIPDSLSV DLTGAVAGTQ ILAGDVTLPA GASLITDAEA LVVAVTVAPT
AEQLDAETEE AEAEAGVVRD EPQAESN