Gene Namu_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4543 
Symbol 
ID8450171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5052037 
End bp5052774 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID645043584 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003203811 
Protein GI258654655 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC TCACTGTCGA CCTCGATCGG TCCAGCCCCG TTCCGCTGTA CTACCAGGTG 
GCCCAGCAGA TCGAGCACGC GATCAACGAC GGGCAGCTGT CCCCCGGTGA TCGCCTGGAC
AACGAGATCA GCCTGGCCGA GCAGTTCGGG CTCTCCCGGC CGACCATGCG CCGGGCCATC
CAGGAGCTGG TGGACAAGGG GCTGCTCGTG CGCAAGCGCG GGGTCGGCAC CCAGGTGGTG
CACGGCCAGG TCAGCCGCCC GGTCGAGCTG ACCAGCCTGT ACGACGATCT GGCCGGCCAC
CACCAGGGCC CCCGCACCGA CGTGCTGACC AACGAGATCG TCCGGGCCGG CGACGAGGTC
GCCGCCGTCC TGGCGGTTCG CCCGGGCAGC AACGTGCTGC ACCTGCGCCG GCTGCGGTTC
GCGCACGAGG AACCGCTGGC GATCATGGAG AACTACCTGC CCGAGGACCT GATCGGCATC
GGCGAGATGG ATCTGGCCGG CCGCGGCCTG TACCAGCTCA TGCGGACCAA GGGCGTGAAC
ATCCGGGTGG CCAAGCAGAA GATCGGCGCC CGGACCGGGA CGCCCGAGGA ATGTGCCCTG
TTGGGCGAGA AGCGCGGCAG CCCGGTCCTG ACCATGGAGC GGGCCGCGCA CGACGATTCC
GGACGGGCCG TCGAGTGGGG CCGGCACGCC TACCGGGCGA GCCAGTACTC CTTCGAGGTC
ACGCTCGTCG AGCACTGA
 
Protein sequence
MSALTVDLDR SSPVPLYYQV AQQIEHAIND GQLSPGDRLD NEISLAEQFG LSRPTMRRAI 
QELVDKGLLV RKRGVGTQVV HGQVSRPVEL TSLYDDLAGH HQGPRTDVLT NEIVRAGDEV
AAVLAVRPGS NVLHLRRLRF AHEEPLAIME NYLPEDLIGI GEMDLAGRGL YQLMRTKGVN
IRVAKQKIGA RTGTPEECAL LGEKRGSPVL TMERAAHDDS GRAVEWGRHA YRASQYSFEV
TLVEH