| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4539 |
|---|
| Symbol | |
|---|
| ID | 8450167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5047100 |
|---|
| End bp | 5049013 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645043580 |
|---|
| Product | thiamine pyrophosphate protein central region |
|---|
| Protein accession | YP_003203807 |
|---|
| Protein GI | 258654651 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3962] Acetolactate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.366125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCG CAGCAGCGTC GCACGCGGGA CAGACCGTCC GACTGACCGT CGGGCAGGCG
GTCGTGAAGT TCCTGGGCAA TCAGTACAGC GAGCGGGACG GTGTGCGGCG CAAGCTGTTC
GCCGGCTGCT TCGGCATCTT CGGGCACGGC AACGTGGCCG GTCTGGGGCA GGCGCTGCTG
CAGGCCGAGC TGGCGGAGCC GGAGCTGCTG CCCTATCACC AGGGTCGCAA CGAGCAGGCG
ATGGTGCACA TTGCGGTCGG GTACGCCCGG CAGAAGGACC GGCTGGAGAC GTTCGCAGTG
ACCGCGTCGG TCGGCCCGGG CTCGTCGAAC ATGCTGACCG GGGCCGCGCT GGCCACCATC
AACCGGTTGC CGGTGCTGCT GCTGGCCAGC GACATCTTCG CCACCCGGGT GGCCTCGCCG
GTCCTGCAGG AGCTGGAACA GCCTTTCGGG TACGACGTCT CGGTCAACGA CGCGTTCCGG
CCGCTGAGCA AGTTCTTCGA CCGGGTGTGG CGGCCCGAGC AGTTGCCGGC GGCCCTGCTG
GGCGCGATGC GGGTGCTGAC CGATCCGGCG GAGACGGGGG CGGTGACGCT GGCCCTGCCG
GAGGACGTGC AGGCCGAGGC GTTCGACTGG CCGGTGGAGC TGTTCGCCGA GCGGGTCTGG
CGGATCGGCC GTCCGGTGCC CGAGCCCGAG GTGATCGCCG CCGCCGCGCA GATCATCCGC
AACGCCAAGG CGCCGCTGAT CGTGTCCGGG GGCGGGGTCA CCTACGCGGA GGCCAACGAC
GAGCTGCGGG CGTTCGTGGA GGCGACCGGC ATCCCGATCA GCGAGACCCA GGCCGGCAAG
GGATCGTTGC CGTTCGACCA CCCGCTGAAC CTGGGCGCGA TCGGCGCGAC CGGTTCCCCG
GCGGCCAACC ACTTCGCCCG CCGGGCCGAC GTGGTGATCG GGATCGGCAC CCGGTACAGC
GATTTCACCA CCGGGTCGAA GACGATCTGG CAGCACCCGG ATGTGCGGTT CGTGAACATC
AACGTGGCCG GGTTGGACGC GTTCAAGCTG GCCGGGTACC CGGTGGTGGC CGACGCGAAG
CGGGCGCTGC CGGCGTTGGC TCAGGCCCTG TCGGGGTACT CGTCCGGACC GGAGTTCCAG
GCGGAGGTCA CCGCCCGGGC CAAGGCGTGG GACGACGAGG TGGTGGCCTC TCACCACAGC
GGGTACGGCG AGACCCACGA GTTCCTGGCC CAGGCCGAGG TTCTCGGCGC GGTCGAGGCG
GCCATGGAGC CGACCGACGT GGTGGTCTGC GCGGCCGGTT CGCTGCCCGG CGATCTGCAC
GGCATGTGGC GCACCCGGGA ACGCAAGGGG TATCACGTCG AGTACGGGTA CTCGTGCATG
GGCTACGAGA TTCCGGGAGC GATCGGGATC AAGCTGGCCG CCCCGGAGCG GGACGTGTTC
GTCACCGTCG GCGACGGCTC GTACCTGATG ATGCCGACCG AGCTGGTGAC CGCGGTGCAG
GAGGGCATCA AGATCATCGT GGTGCTCTTG CAGAACCATG GGTACGCCTC GATCGGCGCG
CTGGCCCAGT CGCTGGGGGT GCAGCGGTTC GGCACCAAGT ACCGGTACCG CAACGCCGAA
TCGGGCCGGC TGGACGGCGG GAAGCTGCCG GTCGACCTGG CCCTGAACGC CGAGTCCATG
GGTGTCACGG TCTACCGGAC GAGGACCCTC GCCGAGCTCA AGGATGCGCT GGCCGCGGCG
AAGGCCGGCG ACGAGCCGTG CCTGGTCCAC GTGGACACCG ACCTGGAGTT CCACTCGCCC
AAGGGCGACG GCTGGTGGGA CGTGCCCGTC GCGCAGGTCT CCACACTGGA CTTCACCCAG
GACGCCCGGA TCCGCTACGA GAAGTCCCGC GCCGACCAGA AGCCCTACCT GTAG
|
|---|
| Protein sequence | MTSAAASHAG QTVRLTVGQA VVKFLGNQYS ERDGVRRKLF AGCFGIFGHG NVAGLGQALL
QAELAEPELL PYHQGRNEQA MVHIAVGYAR QKDRLETFAV TASVGPGSSN MLTGAALATI
NRLPVLLLAS DIFATRVASP VLQELEQPFG YDVSVNDAFR PLSKFFDRVW RPEQLPAALL
GAMRVLTDPA ETGAVTLALP EDVQAEAFDW PVELFAERVW RIGRPVPEPE VIAAAAQIIR
NAKAPLIVSG GGVTYAEAND ELRAFVEATG IPISETQAGK GSLPFDHPLN LGAIGATGSP
AANHFARRAD VVIGIGTRYS DFTTGSKTIW QHPDVRFVNI NVAGLDAFKL AGYPVVADAK
RALPALAQAL SGYSSGPEFQ AEVTARAKAW DDEVVASHHS GYGETHEFLA QAEVLGAVEA
AMEPTDVVVC AAGSLPGDLH GMWRTRERKG YHVEYGYSCM GYEIPGAIGI KLAAPERDVF
VTVGDGSYLM MPTELVTAVQ EGIKIIVVLL QNHGYASIGA LAQSLGVQRF GTKYRYRNAE
SGRLDGGKLP VDLALNAESM GVTVYRTRTL AELKDALAAA KAGDEPCLVH VDTDLEFHSP
KGDGWWDVPV AQVSTLDFTQ DARIRYEKSR ADQKPYL
|
|---|
| |