Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4520 |
Symbol | |
ID | 8450147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5022745 |
End bp | 5024226 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645043560 |
Product | Integrase catalytic region |
Protein accession | YP_003203788 |
Protein GI | 258654632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGG ACACGGTCAA GCAGCGGGAA CGGGCGCAGC AGATCGCGTT GTTCCGATAT CAGTTGATCT GCCCGGCGCT GGAACCGGGC CTGTCGACCA AGCAACGCGG ACGGGTCGTT CGGGCGATCG CCGACCGGGA ACACGACGGC CCGTTCGGCG GCCGGGTCCG ATACTCGCGG GAGTCGTTGG ACCGGTGGAT CCGCCGGTAC CGGGCCGGCG GGTTCGAAGG TCTGTGCCCG TCGCCCCGGG AACCCGGCAC CCGGATCGAC ACCGGCGTGT TCGAGCTGGC CGCCGGTCTG AAACGGGAGA ACCCGGCCCG CACGGTCGCC CAGGTCGCCC GGATCCTGCG ATCCTCGACC GGCTGGTCAC CGTCGGAAAC GACGCTGCTG CGGCATTTCC ACCGGCTGGA CCTGATGGTG CCCGGCGGCG CCGGGCCGGC CGTGTTCGGC CGGTTCGAAG CGGCCGATTG CAACGAACGG TGGGTCGGCG ACGCCCTGCA CGGGCCCAGG GTCGCCGGCC GGAAAACGTA CTTGTTCGCG TTCCTGGACG ACCACAGCCG GGTGGCCGTG GGGTATCGGT TCGGGTTCGC CGAGGACACC GTCCGGCTGG CCGCGGCCCT GCAACCCGCG TTGGGCAGCC GCGGCGTCCC CGGCTCGGTC TACGTCGACA ACGGGTCCGC GTTCGTCGAC AACTGGCTGC TGCGGGCCTG CGCGGTGCTC GGGATCCGGC TCGTCCACAG CCGTCCGGGG CAGCCGCAGG GGCGGGGCAA GATCGAACGC TGGTTCCGCA GCGTGCGCGA CCAGTTCCTG GTCGAGATCG ATGACAGCAC CGCCGACCAG ATCCGGGATA CCGGGATGAC CCCCGCCGGC GCCCTGCTGG AACTCAACGG GTTGTTCACC GCCTGGGTCG AGGCGTCCTA TCACCACCAC GTGCATTCCG AGACCGGGCA GAGCCCCTTG CAACGCTGGA CCGACGGGTG GCAGCGGGCC GGCCGGTCTC CGGCGATGCC GACCCCCGCG GATCTGACCG AGGCGTTCCT GTGGTCCGAA CAACGCGTGG TCACCAGGAC CGCGACGGTG TCGCTGCACG GCAACACCTA CCAGGTTCAG GCGGGGCTGG TCGGTCGGAA AGTCGAGTTG GTGTTCTCCC CGTTCGATCT GGAAACCCTG CGGGTCCGCT ACGACGGCCG GGACCACGGG CCGGCGGTGC CGCATCGGAT CACCCGGCAC ACCCATCCCA AGGCCAGACC CGAGACCCCT GAACCGGCAA CGACACCGCG GACGGGGATC GACTACCTGG CGCTGGTCGC GCAGGACCAC CAGCAACAGA TCAGTGCCGA CCAGAAGATC AACTATCACG CCCTCTACCC AGGTGAGCTG CCCGGGCAGC GCAGCATCGA CGACGCCCTG GCCGACCTCA ACGGCAACGA CGGCAACGAC GGCAACGACG GCAACGACGA TGGTCAGGCG GTGGCCCGGT GA
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Protein sequence | MSVDTVKQRE RAQQIALFRY QLICPALEPG LSTKQRGRVV RAIADREHDG PFGGRVRYSR ESLDRWIRRY RAGGFEGLCP SPREPGTRID TGVFELAAGL KRENPARTVA QVARILRSST GWSPSETTLL RHFHRLDLMV PGGAGPAVFG RFEAADCNER WVGDALHGPR VAGRKTYLFA FLDDHSRVAV GYRFGFAEDT VRLAAALQPA LGSRGVPGSV YVDNGSAFVD NWLLRACAVL GIRLVHSRPG QPQGRGKIER WFRSVRDQFL VEIDDSTADQ IRDTGMTPAG ALLELNGLFT AWVEASYHHH VHSETGQSPL QRWTDGWQRA GRSPAMPTPA DLTEAFLWSE QRVVTRTATV SLHGNTYQVQ AGLVGRKVEL VFSPFDLETL RVRYDGRDHG PAVPHRITRH THPKARPETP EPATTPRTGI DYLALVAQDH QQQISADQKI NYHALYPGEL PGQRSIDDAL ADLNGNDGND GNDGNDDGQA VAR
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