Gene Namu_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4517 
Symbol 
ID8450144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5019281 
End bp5020948 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content69% 
IMG OID645043557 
ProductIstA2 
Protein accessionYP_003203785 
Protein GI258654629 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTCCA AGGTCATGCT GTTCGAACAG ATCCGGCGGG ATTCCCGGGT GGAGGGCTTG 
TCGGTGCGGG CGTTGGCCAA GCGCCACCAT GTGCACCGTC GAACGGTGCG GCAAGCGTTG
GCGTCGGCGG CGCCGCCGGA GCCGGCCCGG CGCAGGTGGC AGTCCCGCAA GATCGACCCG
TTCGTGACCG CGATCGACGC AATGTTGCGG TCGGATCTGA CGGCCCCGCG CAAGCAGCGA
CACACCACGG TGCGGATCCT GGACCGGTTG GTCGAGGAGC ATCAGGCGAC CGGGTTGTCG
TATTCGACGC TGCGGGCCTA TGTCGCCCAG CGGCGGCGGG AGATCTGGGC TGAGGCGGGC
CGGCCGTTGG CGGAGGTGTT CGTCCCGCAG ACGCATCAGC CGGCCGCCGA GGGTGAGGTC
GACTTCGCCG AACTGTGGGT GGATCTGCCC GCCGGTCGGA CGAAGTGCTA CCTGTTCACG
ATGTGGTTGT GCTTCTCGGG TCGGTCGGTG CATCGGGTGT TCCCGACTCA GTCGCAGGAG
GCGTTCCTCG AGGGTCATAT CGCCGCGTTC ACCGAGCTGG GTGGTGTTCC AACGGTGCAC
GTGAAGTACG ACAACCTCAA GTCCGCGGTC TCGGCCGTGC TGTTCGGCAC CGACCGGCGG
CGGACCGAGA ACGAGCGGTG GGTGCTGTTC CGTTCGCACT ACCAATTCGA TGGGTTCTAT
TGCCTGCCCG GCGTCCACGG AGCCCACGAA AAGGGCGGTG TGGAGGGCGA AGGCGGCCGG
TTCCGGCGCA ACCATCTGGT CCCGGTGCCG AAGGTGAAAT CGTTGGCCGA GCTGAATGTT
CGGCTGGCCA AGGCGGACCG GGCCGATGAC CACCGGCGGA TCAACGGCCG GGTGCGCACC
GTGGGCGAGA TGTTCGCCAT CGAGCAGCCC CTGCTCCGGC CGTTGCCGAC CGAGGTGTTC
GAACCGGGCC TGTCGTTGAA CCCGCGGGTC GACCGGCACG CCCGGATCAT GGTGCGTAAC
TGTCAGTACT CGGTGCCAGC CAAGTTCATC GGACGCCGGG TCCGGGTCCA CCTCCGGGCG
GGTGAGGTGA TCGTGTTGGA TGGCCGGACC GTCATCGCCA CCCACGAGCG GTCGGGCCGT
AAGGGCGCCC AGGTGTTGGA CCTGGATCAC TACCTGGAGG TGCTCAAGTA CAAACCCGGC
GCCCTGCCCG GGGCGACCGC CCTGGTCCAG GCTCGCGCCT GCGGGGCGTT CACCAGTGCG
CACGAGGCGT TCTGGGCGGC GGCCCGCAAG GCTCACGGCG ACGCCGCCGG CACCCGGGAA
CTGATCGACG TGCTGCTGCT GCATCGGCAC ATGCCGGCGG TCGACGTCGT CGCCGGGTTG
ACCGCCGCCC TGCGAGTCGG CGCGACCCAG GCCGATGTGG TGGCCGTGGA AGCCCGCAAA
CAGCAGCGTG GGGCCACGCA ACCCGAGCAT CCCGTCGGTC AGGACGACAG TGCCGGGCAG
CGGGTGGTCA GTCTGACCGA GCGGCGGCTG TCCGACCCGA CCGCGGTGAT CGCCGGGCTG
CCGCCGGATT CCCGGCCGTT GCCGTCGGTC GACCGTTACG ACGAGCTGCT CACCCGCCGC
AAGACCGCGC CGCCGGCGGC GGACCTGTCG AAAGGCAACG TGTCATGA
 
Protein sequence
MRSKVMLFEQ IRRDSRVEGL SVRALAKRHH VHRRTVRQAL ASAAPPEPAR RRWQSRKIDP 
FVTAIDAMLR SDLTAPRKQR HTTVRILDRL VEEHQATGLS YSTLRAYVAQ RRREIWAEAG
RPLAEVFVPQ THQPAAEGEV DFAELWVDLP AGRTKCYLFT MWLCFSGRSV HRVFPTQSQE
AFLEGHIAAF TELGGVPTVH VKYDNLKSAV SAVLFGTDRR RTENERWVLF RSHYQFDGFY
CLPGVHGAHE KGGVEGEGGR FRRNHLVPVP KVKSLAELNV RLAKADRADD HRRINGRVRT
VGEMFAIEQP LLRPLPTEVF EPGLSLNPRV DRHARIMVRN CQYSVPAKFI GRRVRVHLRA
GEVIVLDGRT VIATHERSGR KGAQVLDLDH YLEVLKYKPG ALPGATALVQ ARACGAFTSA
HEAFWAAARK AHGDAAGTRE LIDVLLLHRH MPAVDVVAGL TAALRVGATQ ADVVAVEARK
QQRGATQPEH PVGQDDSAGQ RVVSLTERRL SDPTAVIAGL PPDSRPLPSV DRYDELLTRR
KTAPPAADLS KGNVS