Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4517 |
Symbol | |
ID | 8450144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5019281 |
End bp | 5020948 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645043557 |
Product | IstA2 |
Protein accession | YP_003203785 |
Protein GI | 258654629 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGTCCA AGGTCATGCT GTTCGAACAG ATCCGGCGGG ATTCCCGGGT GGAGGGCTTG TCGGTGCGGG CGTTGGCCAA GCGCCACCAT GTGCACCGTC GAACGGTGCG GCAAGCGTTG GCGTCGGCGG CGCCGCCGGA GCCGGCCCGG CGCAGGTGGC AGTCCCGCAA GATCGACCCG TTCGTGACCG CGATCGACGC AATGTTGCGG TCGGATCTGA CGGCCCCGCG CAAGCAGCGA CACACCACGG TGCGGATCCT GGACCGGTTG GTCGAGGAGC ATCAGGCGAC CGGGTTGTCG TATTCGACGC TGCGGGCCTA TGTCGCCCAG CGGCGGCGGG AGATCTGGGC TGAGGCGGGC CGGCCGTTGG CGGAGGTGTT CGTCCCGCAG ACGCATCAGC CGGCCGCCGA GGGTGAGGTC GACTTCGCCG AACTGTGGGT GGATCTGCCC GCCGGTCGGA CGAAGTGCTA CCTGTTCACG ATGTGGTTGT GCTTCTCGGG TCGGTCGGTG CATCGGGTGT TCCCGACTCA GTCGCAGGAG GCGTTCCTCG AGGGTCATAT CGCCGCGTTC ACCGAGCTGG GTGGTGTTCC AACGGTGCAC GTGAAGTACG ACAACCTCAA GTCCGCGGTC TCGGCCGTGC TGTTCGGCAC CGACCGGCGG CGGACCGAGA ACGAGCGGTG GGTGCTGTTC CGTTCGCACT ACCAATTCGA TGGGTTCTAT TGCCTGCCCG GCGTCCACGG AGCCCACGAA AAGGGCGGTG TGGAGGGCGA AGGCGGCCGG TTCCGGCGCA ACCATCTGGT CCCGGTGCCG AAGGTGAAAT CGTTGGCCGA GCTGAATGTT CGGCTGGCCA AGGCGGACCG GGCCGATGAC CACCGGCGGA TCAACGGCCG GGTGCGCACC GTGGGCGAGA TGTTCGCCAT CGAGCAGCCC CTGCTCCGGC CGTTGCCGAC CGAGGTGTTC GAACCGGGCC TGTCGTTGAA CCCGCGGGTC GACCGGCACG CCCGGATCAT GGTGCGTAAC TGTCAGTACT CGGTGCCAGC CAAGTTCATC GGACGCCGGG TCCGGGTCCA CCTCCGGGCG GGTGAGGTGA TCGTGTTGGA TGGCCGGACC GTCATCGCCA CCCACGAGCG GTCGGGCCGT AAGGGCGCCC AGGTGTTGGA CCTGGATCAC TACCTGGAGG TGCTCAAGTA CAAACCCGGC GCCCTGCCCG GGGCGACCGC CCTGGTCCAG GCTCGCGCCT GCGGGGCGTT CACCAGTGCG CACGAGGCGT TCTGGGCGGC GGCCCGCAAG GCTCACGGCG ACGCCGCCGG CACCCGGGAA CTGATCGACG TGCTGCTGCT GCATCGGCAC ATGCCGGCGG TCGACGTCGT CGCCGGGTTG ACCGCCGCCC TGCGAGTCGG CGCGACCCAG GCCGATGTGG TGGCCGTGGA AGCCCGCAAA CAGCAGCGTG GGGCCACGCA ACCCGAGCAT CCCGTCGGTC AGGACGACAG TGCCGGGCAG CGGGTGGTCA GTCTGACCGA GCGGCGGCTG TCCGACCCGA CCGCGGTGAT CGCCGGGCTG CCGCCGGATT CCCGGCCGTT GCCGTCGGTC GACCGTTACG ACGAGCTGCT CACCCGCCGC AAGACCGCGC CGCCGGCGGC GGACCTGTCG AAAGGCAACG TGTCATGA
|
Protein sequence | MRSKVMLFEQ IRRDSRVEGL SVRALAKRHH VHRRTVRQAL ASAAPPEPAR RRWQSRKIDP FVTAIDAMLR SDLTAPRKQR HTTVRILDRL VEEHQATGLS YSTLRAYVAQ RRREIWAEAG RPLAEVFVPQ THQPAAEGEV DFAELWVDLP AGRTKCYLFT MWLCFSGRSV HRVFPTQSQE AFLEGHIAAF TELGGVPTVH VKYDNLKSAV SAVLFGTDRR RTENERWVLF RSHYQFDGFY CLPGVHGAHE KGGVEGEGGR FRRNHLVPVP KVKSLAELNV RLAKADRADD HRRINGRVRT VGEMFAIEQP LLRPLPTEVF EPGLSLNPRV DRHARIMVRN CQYSVPAKFI GRRVRVHLRA GEVIVLDGRT VIATHERSGR KGAQVLDLDH YLEVLKYKPG ALPGATALVQ ARACGAFTSA HEAFWAAARK AHGDAAGTRE LIDVLLLHRH MPAVDVVAGL TAALRVGATQ ADVVAVEARK QQRGATQPEH PVGQDDSAGQ RVVSLTERRL SDPTAVIAGL PPDSRPLPSV DRYDELLTRR KTAPPAADLS KGNVS
|
| |