Gene Namu_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4478 
Symbol 
ID8450105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4975947 
End bp4977947 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content58% 
IMG OID645043522 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_003203750 
Protein GI258654594 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.48246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGTA TTGCGGGCAT CCTCAGTTTC CGTGACGCGC CAGACCGCGA TCTGATTTGC 
AGCATGATCG GTCGGTTGAG CCATAGGGGT CCAGACAGCA GCGGGTACTA CCGGGACCGG
TGGATAGCAC TCGGTCATTC ACGGCTCTCC ATTATCGACA CTGCAGGCGG TGCGCAGCCT
CTGGCAAACG AGGACGGCAC GGTTTGGGTC TCGTTCAATG GTGAGATATT CAACTACCTT
GAACTGGCGG CCGAGCTACG GACGCTCGGT CATCGGTTCA GAACGGTGAG CGACACCGAA
GTCATCGTCC ATGCCTGGGA AGAATGGGGA CCTGACGCCT TCGAGCGGTT CAACGGACAA
TGGGCGCTCG CCCTTTGGGA ATCTCGCACG CGTCGATTGA TCCTCAGTCG AGATCGACTC
GGCGTCCGAC CACTCTACAC TTCAAGAGCT GGATCAGACA TCATCTTCGC GTCCGAGGTA
AAGGCCCTGT TCGCGCATCC TGATGTCGCG CGTGGTATTG ATCCGGAGGG ACTTGGCCAG
GCGCTGACAC TTTGGTCGAC GGTAGCGCCC GTCTCGGTAT TCACCGGAAT AAGACAGGTT
CCACCCGGGT GCTACATGCT GATCGATCAG CACGGCGAGC GGACACGGCA GTACTGGCAT
TTGAATTTTC CCGACGCGGG ACGAGAAGTC CTCCAGGATA TTGAAGAGAA CGCGACCGAG
CTTCGGCGCC TTGTTGAGGC GGCAACGCGC CTGCGCTTCG AACGTTCAGA TGTGCCCGTC
GGGGCCTACC TATCGGGCGG CCTGGACTCC ACCATCACAG CCTCCGTTGT AGCGTCGGTC
ACATCCGCGC CTGTTAGGAC CTTCTCGCTT CGATTTGCTG ACCGTGAGTT CGATGAGGGG
AAGTACCAGC AAGAACTTGC GGGGAGATTA GGGACCGAAC ACCACGAAGT CGTTGTCGAA
TCGAAAGACA TCGCGGACGT GTTTCCGGAC GTGGTATTTC ACGCGGAGAA TCCTTTGCTC
CGGTCGGCGC CGGCACCACT TTTCCTGTTA TCGCGCCTAG TCGCCGACTC GGGGTACAAG
GTGGTTGTCA CCGGCGAGGG GGCCGACGAG GTGCTGGCCG GCTATGACAT CTTCCGAGAA
GCGCGACTCC GGGAGTTCTG GTTGCGCGAT CCATCATCTA AGGTCCGTGA TCGCGGAGTG
GAGCTCCTAT ACCCGTGGTT ACATCGATCA CCCACAGCGG CACCGTCGTT TGCGAGACAA
TTCTTTGGCT TGGACCTTAC GGCAAGTGAT CTTGCCTTAT CGCACCGTCC TCGCTGGAAC
TCAACCGCAG TCTTGCTCCA TCTTCTTAGC CCCGATCTTC GCGCTTCCAT CGTCGACCCG
ATCGCGCCGC TGCTCGCGCG GATGTCAGCG GGCGCTGACA GGTGGGACCT GCTTAGTCGT
GCACAATGGC TCGAGGCAAC GACACTTCTC CCAGGCTACA TCCTTGCATC GCAAGGTGAC
CGGATGCTGA TGGCGAACTC GGTCGAAGGA CGTTTTCCCT TTCTGGACAA GGACGTGGTC
GAGTTCGCTG CGAAGTTGCC GGCAAGACAT AAAATGCTCG GACTCGATGA GAAGCACATC
CTCAAGCGCG CGTTTGAAGA CATTGTTCCC GAGTCCATCC TTACCCGACC CAAACAGCCT
TACCGTGCAC CCGACGCATC GTCGTTCTTT GGTCCAGGTA CCAGACCGGA TTGGATGGCA
GAGTTGTTGT CCCCGTCGGC GGTCGAGGAC GCAGGCATCT TCCAGCCTAG GGTTGTCGAA
GCGCTCGTCG CAAAATGCCA GCGAACACAA GGACTGCGAA TGAGCAATAC CGACAATATG
CGGATCATGG CCGTGCTATC AACGCAGCTC CTGCACGAGA TATTTGTTGT ACAAGGAGGT
CAGCACAAGG GCGACGGCCC CCGCATTTCA AGCCCTACAA CGGTTATCGA CAATCTAGTA
AATGATGGGA GCTTTTCATG A
 
Protein sequence
MCGIAGILSF RDAPDRDLIC SMIGRLSHRG PDSSGYYRDR WIALGHSRLS IIDTAGGAQP 
LANEDGTVWV SFNGEIFNYL ELAAELRTLG HRFRTVSDTE VIVHAWEEWG PDAFERFNGQ
WALALWESRT RRLILSRDRL GVRPLYTSRA GSDIIFASEV KALFAHPDVA RGIDPEGLGQ
ALTLWSTVAP VSVFTGIRQV PPGCYMLIDQ HGERTRQYWH LNFPDAGREV LQDIEENATE
LRRLVEAATR LRFERSDVPV GAYLSGGLDS TITASVVASV TSAPVRTFSL RFADREFDEG
KYQQELAGRL GTEHHEVVVE SKDIADVFPD VVFHAENPLL RSAPAPLFLL SRLVADSGYK
VVVTGEGADE VLAGYDIFRE ARLREFWLRD PSSKVRDRGV ELLYPWLHRS PTAAPSFARQ
FFGLDLTASD LALSHRPRWN STAVLLHLLS PDLRASIVDP IAPLLARMSA GADRWDLLSR
AQWLEATTLL PGYILASQGD RMLMANSVEG RFPFLDKDVV EFAAKLPARH KMLGLDEKHI
LKRAFEDIVP ESILTRPKQP YRAPDASSFF GPGTRPDWMA ELLSPSAVED AGIFQPRVVE
ALVAKCQRTQ GLRMSNTDNM RIMAVLSTQL LHEIFVVQGG QHKGDGPRIS SPTTVIDNLV
NDGSFS