Gene Namu_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4471 
Symbol 
ID8450098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4969105 
End bp4969944 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content63% 
IMG OID645043516 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_003203744 
Protein GI258654588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTCT GGGGTATTAC GATCGCGGCA CTTCGACGGT GGTATATCTT CCTGGCAATC 
TTCGCACTCG CGGGGTTCGG TGCCTACTCC GCTGGCAAAT CGGCGCATCC TGAGTACGAA
GCGTCCGCAT CTGCCTTGCT CACTCCCCCG CCTACGGTCG CACCGGTCGC TAACCCATTC
GGGAATGTCG ACGGAGCCAA CCAGGCGCTC GCCATCATCC TCAACGGTCC AGACACCGAG
ACAGCACTCG CGCAACAGGG CCTGATCCCA TCGTTCACCG TGACAAGTCA AGCACGAAGC
TCGATCTTCA ACATCGGCGT TCGCGGCGAG AACCCGAACC AAGTGGTCGC CACCGCGCAA
GCAGCGCTGG ACATCGCCAC GACCCAACTC AAACAGCGTC AAACGGCCGG TGGGGTACCC
GACGCCAACC AGATCGGGCT GCAGGTGTTG TCAGCACCGG TGATCACGAA CGTTGTCACA
GACGGCGCCC TTCGGGTTCA AGCAGTGATT CTCGTGCTCG GTGCTGCGGT TGCCTTGGCA
GTCGCGGTAT TATTTGACGA CATTGTCGGG CTGCTTCGTC GGCGACGTCG GAACAAGAAG
GTCGCCGCCC AGTCTGATTC CGCGGTACCG GGCCATCGCG AAATCACCGG CACGACGGCT
TCACGTGTTC CAATGCCGCA GAGTGGGCCG ACCGAAACCG GCGCCACTCG CCAATCCAGG
CGTCTCCGGC CCCGAGATCC GGCGCCATCC CGCGGACCGG CCGGCGGGTC TACCAGCACG
TCATATCAGC CCGCTGTCCA GGCCATCGGT TCCTCGTCCG CCAGCGGTTC CCGCCGGTGA
 
Protein sequence
MDVWGITIAA LRRWYIFLAI FALAGFGAYS AGKSAHPEYE ASASALLTPP PTVAPVANPF 
GNVDGANQAL AIILNGPDTE TALAQQGLIP SFTVTSQARS SIFNIGVRGE NPNQVVATAQ
AALDIATTQL KQRQTAGGVP DANQIGLQVL SAPVITNVVT DGALRVQAVI LVLGAAVALA
VAVLFDDIVG LLRRRRRNKK VAAQSDSAVP GHREITGTTA SRVPMPQSGP TETGATRQSR
RLRPRDPAPS RGPAGGSTST SYQPAVQAIG SSSASGSRR