Gene Namu_4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4437 
Symbol 
ID8450064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4922082 
End bp4922594 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content76% 
IMG OID645043484 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003203712 
Protein GI258654556 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.302453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCG CCCCCTTCGA ACGCGTCGTT GACGCCCACG GCCCCACGGT GCTGCGGGTC 
TGCCGGGCGC TGCTGGGTCC GGCCGATGCG GACGACGCGT GGTCGGAGAC GTTCCTGGCC
GCCCTGCGGG CCTACCCGGA GCTGCCCGCG GACGCCAACG TCGAGGCCTG GTTGGTGACC
ATCGCCCACC GTAAATCGAT CGACGTGGTC CGGGCCCGCG GCCGCCGGGC GGTGCCGCTG
GCCGAGCCGC CGGACGCGCC GTCCGCGCTG GGCAATCCAC GCGAGCCGGC CGATGAGCTG
TGGGCCGCGG TGCGCGCCCT GCCGGACCGG CAACGCCACG CGGTCGCCTA CCACCACGTC
GCCGGGCTGC CGCATCGCGA GGTGGCGCAG ATCCTCGGCG GCACCCCGGA GGCGGTCCGC
CGGGCCGCCG CCGACGGCAT CAAGACGCTG CGTCGCAGCA TGGCCGACCC GGGCACCGGT
TCGACCCGGT CCGAGGAAGG AGCATCGGCA TGA
 
Protein sequence
MPTAPFERVV DAHGPTVLRV CRALLGPADA DDAWSETFLA ALRAYPELPA DANVEAWLVT 
IAHRKSIDVV RARGRRAVPL AEPPDAPSAL GNPREPADEL WAAVRALPDR QRHAVAYHHV
AGLPHREVAQ ILGGTPEAVR RAAADGIKTL RRSMADPGTG STRSEEGASA