Gene Namu_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4412 
Symbol 
ID8450038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4896701 
End bp4897774 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content72% 
IMG OID645043459 
Productprotein of unknown function DUF190 
Protein accessionYP_003203688 
Protein GI258654532 
COG category[S] Function unknown 
COG ID[COG1993] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.886587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGG ACTGCCTCAA GCTGACCTGT TACTTCGGCG AACGTCACCG CACCCCGGGC 
GGGTTCGTCG CCGATCAACT GCTGGACATC TTCGGCCGGG CCGAGCTGGC CACCAGCATC
ATGATGCGTG GCGTCGAGGG CTTCGGCTTC AAGCACCACC TGCGCACCGA CGCGTCGCTG
ACGCTGTCCG AGGACCTGCC GGCCGCGGCC GTCGCGGTCG ACCTGCGGCC GCGGATCGAG
GCCGTGCTGG ACGAGGTCCT CGCGCTGCCG GCGATCGGCC TGACCACGCT GGAACGAGCC
CGGCTGGTAA CCGGCCCGGT GCTGGCGCCG CCGCCCGACG ACCCGACCGA GGCCACCCGG
CTGACCGTCT ACCTGGGCCG GCAGGACCGG GTGGGCGCGG TCCCGGCGTT CGTCGCCGTC
TGCCGGCTGC TGCAGGAGCA GGGCATCGCC GGGGCCACCG TGCTGCTCGG GGTCGACGGA
ACGGTCCGCG GCCGGCGGCA GCGGGCCCGC TTCTTCAGCC GCAACGCCGA CGTGCCGATG
ATGGTGCTGG CCGTCGGTCC GGACGATCGG GTGGCGCAGG TGCTGCCCGC ACTGAGCCGG
ATGCTCCTCC GCCCCCTGCT CACCCTGGAG CGGGTGCGGA TCTGCAAGCA GGACGGCCAA
CTGTTCGCGG CCCCGCAGAA GATCCCGGCC ACCGATCAGC GGGGCCGAGC TCTGTTTCAC
AAGCTCTCGA TCTTCACCAA CGAGGACGCC ACCCGGCACG GCCAGCCCAT TCATCGGGCC
GTCACCCGGG CCCTGCGGGC GGGCGGCGCC CGCGGGTCGA CCACGCTGCG CGGCGTGTGG
GGATTTCACG ACGGCCGGCC GCCGCAGGGC GACCGCCCGT TCCAGCTGGG TCGGCACGTC
CCCACGCTCA CCGTGGTGGT GGACACCCCC GACCGCGTCG ACCGGATCTT CCCGATCGTC
GACGAGTTCA CCCGCGACCG CGGCCTGGTC ATCAGTGAAC TGGTCCCGGC CGCCCGGGTC
CGCACGGTCA CCGGTTACTG GGGCGAGCTG GAGCTGGCCG ATCACCGCTG GTAG
 
Protein sequence
MNPDCLKLTC YFGERHRTPG GFVADQLLDI FGRAELATSI MMRGVEGFGF KHHLRTDASL 
TLSEDLPAAA VAVDLRPRIE AVLDEVLALP AIGLTTLERA RLVTGPVLAP PPDDPTEATR
LTVYLGRQDR VGAVPAFVAV CRLLQEQGIA GATVLLGVDG TVRGRRQRAR FFSRNADVPM
MVLAVGPDDR VAQVLPALSR MLLRPLLTLE RVRICKQDGQ LFAAPQKIPA TDQRGRALFH
KLSIFTNEDA TRHGQPIHRA VTRALRAGGA RGSTTLRGVW GFHDGRPPQG DRPFQLGRHV
PTLTVVVDTP DRVDRIFPIV DEFTRDRGLV ISELVPAARV RTVTGYWGEL ELADHRW