Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4397 |
Symbol | |
ID | 8450023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4878774 |
End bp | 4880195 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645043444 |
Product | fumarate lyase |
Protein accession | YP_003203673 |
Protein GI | 258654517 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC ACGACGACGT GACCCCCGGC TCCACCGACG TGGAGTACCG CATCGAACAC GACACCATGG GCGAAGTGCG GGTGCCCAAG AACGCGAAGT ACCAGGCGCA GACGCAGCGG GCGGTGGAGA ACTTCCCGAT CTCCGGTCGG GCCCTGGAGC GGACACAGGT CCGGGCGCTG GCCCTGATCA AGGCGGCCGC GGCCAAGGTG AACGCCAAGC TGGGCGTCAT CCCGGAGGAC ATCGGCGCCG CCATCGAGCG GGCCGCCCAC GAGATCGCCC GCGGCCGGTA CTACGAGGAC TTCCCGCTGG ACGTGTTCCA GACCGGGTCG GGCACCAGCT CGAACATGAA CACCAACGAG GTCATCTCGA CGCTGGCCAC CGAGTCGCTG GGCCGCAAGG TCCACCCCAA CGACCACGTC AACGCCTCGC AGTCGTCCAA CGACGTCTTC CCGACCTCGA TCCACGTGGC CGCCACCGAG ATGGTCGTCT ACAAGCTGAT CCCGGCGCTG GCCCATCTGG AGAAGGCCCT GGAGGACAAG GCGCAGGCCT GGTCCGAGGT CGTCAAGTCC GGCCGCACCC ACCTGATGGA CGCCACCCCG GTCACTCTGG GCCAGGAGTT CGGCGGCTAC GCCGCGCAGG TCCGGCTGGG CCAGGAGCGG CTCAAGGCCT CCCTGCCCCG GCTGGCCGAG CTGCCGCTGG GCGGCACCGC CGTCGGCACC GGCATCAACA CTCCCCCCGG CTTCTCAGCC GCCGTCATCG GCGAGCTGGC CCACATCACC AGCCTGCCGT TCACCGAGGC CCGCAACCAC TTCGAGGCCC AGGCGTCCCG CGACGGCCTG GTCGAGACCT CCGGCCAGCT GCGGACCATC GCGGTCAGCC TGACCAAGAT CTGCAACGAC CTGCGCTGGA TGGGCTCGGG CCCGACCGCC GGCCTGGGCG AGATCGCCCT GCCCGACCTG CAGCCGGGGT CCTCGATTAT GCCCGGCAAG GTCAACCCGG TGCTGCCGGA GGCCACGCTG ATGGTCTGCG CCCAGGTCAT GGGCAACGAC GCGACGGTGG CCTTCGCCGG CTCCCAGGGC AACTTCGAGC TCAACGTCAT GTTCCCGGTG ATCGGCCGGA ACCTGCTGGA GTCGATCAAC CTGCTGGCCA ACGCGAGCCG CGTGCTGGCC GACCGCTGCA TCGTCGGCAC GGTCGCCAAC GTCGAGCGGT GCCGGGCCTA CGCCGAGTCC TCGCCGTCGA TCGTGACCCC GCTGAACAAG TACATCGGTT ACGAGGAAGC GGCCAAGATC GCCAAGCTGG CCCTCAAGGA GGGCAAGACG ATCAAGCAGG TCGTGCTCGA GCGCGGCCAC GTCGAGAAGG GCAACCTGAC CGCCGAGCAG CTCGACGCCG CGCTCGACGT GCTCTCGATG ACCCACCCGT AA
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Protein sequence | MAEHDDVTPG STDVEYRIEH DTMGEVRVPK NAKYQAQTQR AVENFPISGR ALERTQVRAL ALIKAAAAKV NAKLGVIPED IGAAIERAAH EIARGRYYED FPLDVFQTGS GTSSNMNTNE VISTLATESL GRKVHPNDHV NASQSSNDVF PTSIHVAATE MVVYKLIPAL AHLEKALEDK AQAWSEVVKS GRTHLMDATP VTLGQEFGGY AAQVRLGQER LKASLPRLAE LPLGGTAVGT GINTPPGFSA AVIGELAHIT SLPFTEARNH FEAQASRDGL VETSGQLRTI AVSLTKICND LRWMGSGPTA GLGEIALPDL QPGSSIMPGK VNPVLPEATL MVCAQVMGND ATVAFAGSQG NFELNVMFPV IGRNLLESIN LLANASRVLA DRCIVGTVAN VERCRAYAES SPSIVTPLNK YIGYEEAAKI AKLALKEGKT IKQVVLERGH VEKGNLTAEQ LDAALDVLSM THP
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