Gene Namu_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4397 
Symbol 
ID8450023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4878774 
End bp4880195 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content69% 
IMG OID645043444 
Productfumarate lyase 
Protein accessionYP_003203673 
Protein GI258654517 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC ACGACGACGT GACCCCCGGC TCCACCGACG TGGAGTACCG CATCGAACAC 
GACACCATGG GCGAAGTGCG GGTGCCCAAG AACGCGAAGT ACCAGGCGCA GACGCAGCGG
GCGGTGGAGA ACTTCCCGAT CTCCGGTCGG GCCCTGGAGC GGACACAGGT CCGGGCGCTG
GCCCTGATCA AGGCGGCCGC GGCCAAGGTG AACGCCAAGC TGGGCGTCAT CCCGGAGGAC
ATCGGCGCCG CCATCGAGCG GGCCGCCCAC GAGATCGCCC GCGGCCGGTA CTACGAGGAC
TTCCCGCTGG ACGTGTTCCA GACCGGGTCG GGCACCAGCT CGAACATGAA CACCAACGAG
GTCATCTCGA CGCTGGCCAC CGAGTCGCTG GGCCGCAAGG TCCACCCCAA CGACCACGTC
AACGCCTCGC AGTCGTCCAA CGACGTCTTC CCGACCTCGA TCCACGTGGC CGCCACCGAG
ATGGTCGTCT ACAAGCTGAT CCCGGCGCTG GCCCATCTGG AGAAGGCCCT GGAGGACAAG
GCGCAGGCCT GGTCCGAGGT CGTCAAGTCC GGCCGCACCC ACCTGATGGA CGCCACCCCG
GTCACTCTGG GCCAGGAGTT CGGCGGCTAC GCCGCGCAGG TCCGGCTGGG CCAGGAGCGG
CTCAAGGCCT CCCTGCCCCG GCTGGCCGAG CTGCCGCTGG GCGGCACCGC CGTCGGCACC
GGCATCAACA CTCCCCCCGG CTTCTCAGCC GCCGTCATCG GCGAGCTGGC CCACATCACC
AGCCTGCCGT TCACCGAGGC CCGCAACCAC TTCGAGGCCC AGGCGTCCCG CGACGGCCTG
GTCGAGACCT CCGGCCAGCT GCGGACCATC GCGGTCAGCC TGACCAAGAT CTGCAACGAC
CTGCGCTGGA TGGGCTCGGG CCCGACCGCC GGCCTGGGCG AGATCGCCCT GCCCGACCTG
CAGCCGGGGT CCTCGATTAT GCCCGGCAAG GTCAACCCGG TGCTGCCGGA GGCCACGCTG
ATGGTCTGCG CCCAGGTCAT GGGCAACGAC GCGACGGTGG CCTTCGCCGG CTCCCAGGGC
AACTTCGAGC TCAACGTCAT GTTCCCGGTG ATCGGCCGGA ACCTGCTGGA GTCGATCAAC
CTGCTGGCCA ACGCGAGCCG CGTGCTGGCC GACCGCTGCA TCGTCGGCAC GGTCGCCAAC
GTCGAGCGGT GCCGGGCCTA CGCCGAGTCC TCGCCGTCGA TCGTGACCCC GCTGAACAAG
TACATCGGTT ACGAGGAAGC GGCCAAGATC GCCAAGCTGG CCCTCAAGGA GGGCAAGACG
ATCAAGCAGG TCGTGCTCGA GCGCGGCCAC GTCGAGAAGG GCAACCTGAC CGCCGAGCAG
CTCGACGCCG CGCTCGACGT GCTCTCGATG ACCCACCCGT AA
 
Protein sequence
MAEHDDVTPG STDVEYRIEH DTMGEVRVPK NAKYQAQTQR AVENFPISGR ALERTQVRAL 
ALIKAAAAKV NAKLGVIPED IGAAIERAAH EIARGRYYED FPLDVFQTGS GTSSNMNTNE
VISTLATESL GRKVHPNDHV NASQSSNDVF PTSIHVAATE MVVYKLIPAL AHLEKALEDK
AQAWSEVVKS GRTHLMDATP VTLGQEFGGY AAQVRLGQER LKASLPRLAE LPLGGTAVGT
GINTPPGFSA AVIGELAHIT SLPFTEARNH FEAQASRDGL VETSGQLRTI AVSLTKICND
LRWMGSGPTA GLGEIALPDL QPGSSIMPGK VNPVLPEATL MVCAQVMGND ATVAFAGSQG
NFELNVMFPV IGRNLLESIN LLANASRVLA DRCIVGTVAN VERCRAYAES SPSIVTPLNK
YIGYEEAAKI AKLALKEGKT IKQVVLERGH VEKGNLTAEQ LDAALDVLSM THP