Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4374 |
Symbol | |
ID | 8450000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4857758 |
End bp | 4858894 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645043421 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_003203650 |
Protein GI | 258654494 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGCCA GTCGTCTTCG TTTCGCCCGC GTCAAACCCG TCGCCCTGCT CGGTGGGGCC GTGGCCGCCC TGCTGCTGGT CACCGCCTGC GGCTCCTCCT CCACCGCCTC TGAAACCACT GCCCAGGCCG CCGCTTCCGG CTCGGCCGCT GGCTCCGCGG CGCCGGCCGG CACCGCCGCC GACACCCTGC GCCTGGGGTA CTTCCCGAAC GTCACGCACG CCGCCGCCGT GCTCGGCGTC GCCAACGGCA CCTTCCAGTC CGCGCTGGGC GACACCAAGC TCGAGACCAG TACTTTCAAT GCCGGCCCGG CCGCGATCGA GGCCCTGCTC TCCGGCGCCA TCGACGCCAC CTTCATCGGC CCCAACCCGG CCATCAACTC CTTCGTCAAG TCCAACGGTG ACTCCATCCG GATCGTCGCC GGCGCGACCG ACAACGGTGC CGCCCTCGTC GTCTCGCCCG ACATCAACTC GGCCGCCGAC CTCAAGGGCA AGACGGTGGC CACCCCGCAG CTGGGTGGCA CCCAGGACGT CGCCCTGCGC AAGTGGTTGC TGGACAACGG CCTGAAGGTG CAGACGACCG GTGGCGACGA CGTCGACATC GTCAACCAGG AGAACTCGCA GACCCTCGAT CTGTTCAAGA GCGGGGAGAT CGCCGGCGCC TGGCTGCCCG AGCCGTGGGC GTCCCGCCTG GCCCTCGAGG CCAACGGCAA GGTGCTGGTC GACGAGAAGA CCCTGTGGCC GGACGAGAAG TTCCAGACCA CCATCCTGAT CTCCTCCCGG CAGTTCCTGG AGGATCACCC GGACACGATC AAGGCGCTGA TCGGTGGCGA AATCACCGAG ATCAAGGCGA TCGAAGCCGA TCCCGCCGGA TCGCAGACCG CCCTGAACAA GGCGCTGGGT GAGCTGACCG GAAAGCCCCT GCAGGACGCC ACCATCACCG CGGCGTTCGC CAACATCGAA CCGACCTGGG ATCCGCTGGC CGGGACGCTG AACACGATCG CCGAGAACGG CGTCGCCGCC GGCACCCTGT CCGAGGTGCC CGATCTCAAG GGCATCTACG ACCTGCGGCA GCTCAATGCC GTCCTCGCCG AGCAGGGCGA GAAGCCGGTC AGCGCGGCCG GTCTCGGCCA GGAGTAG
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Protein sequence | MSASRLRFAR VKPVALLGGA VAALLLVTAC GSSSTASETT AQAAASGSAA GSAAPAGTAA DTLRLGYFPN VTHAAAVLGV ANGTFQSALG DTKLETSTFN AGPAAIEALL SGAIDATFIG PNPAINSFVK SNGDSIRIVA GATDNGAALV VSPDINSAAD LKGKTVATPQ LGGTQDVALR KWLLDNGLKV QTTGGDDVDI VNQENSQTLD LFKSGEIAGA WLPEPWASRL ALEANGKVLV DEKTLWPDEK FQTTILISSR QFLEDHPDTI KALIGGEITE IKAIEADPAG SQTALNKALG ELTGKPLQDA TITAAFANIE PTWDPLAGTL NTIAENGVAA GTLSEVPDLK GIYDLRQLNA VLAEQGEKPV SAAGLGQE
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