| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4369 |
|---|
| Symbol | |
|---|
| ID | 8449995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4853876 |
|---|
| End bp | 4854778 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 645043416 |
|---|
| Product | AlkA domain protein |
|---|
| Protein accession | YP_003203645 |
|---|
| Protein GI | 258654489 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAC GAGTGAGCGC TCCCCTGCCC GACCCCGTCG TCGTCGACCT GCCCGTGGCC
GGCCCGTTCG CCGCCGACCG GCTGCTGGCC TTCCTGAGCC GGGAGTCGGT GCCGGGCGTC
GAGTACGTCC GGGAGCGGGA GTACGCCCGG AGCCTGCGCC TGGGGTCGGG GGACGACGCC
GAGGTGGGCA CGATCCGGCT GCACCTGCCC GGTCCCGGTG ACCCGCCGAC GGTCCGCGCC
GTCGTGCGGT TCGCCGCCCG GATCGACGAG GCCGTCGCCC GCTGCCGGCA CCTGCTGGAC
CTGGACACCG ACGGGTCGGC GGTCGACCGG GTGCTGCGGG CCGACCCGGG CCTGGCCGCG
TCGGTGCAGC GGTGTCCGGG GCTGCGGGTA CCCGGTCCGG CCGAGCCGGC CGAGACCGTG
GTGCGGACGA TCCTGGGCCA GCAGGTGTCG GTGGCCGGCG CCCGCACCGC GGCGACCCGG
CTGGTCGCAC TGGCCGACGA CCGGTTGCCC GAACCGGTCG ACGGGCTGAC CCACCTGTTC
CCGGAGCCGG CCCGCATCGC CGCGCTCGGA CCCACCGCGT TCGTCGGCCC CCGGATCCGG
GCCCAGGCCG TCGTCACCGC CGCTGCCGCG ATCGCCGGCG GCACCCTGCG CCTGGACCGC
ACCGACGCGC ACGCCCGCGG CGTGCTGCTG GCCATGCCCG GCATCGGGCC CTGGACCGCG
GACTACCTGT CCATGCGCGT CTTCGGCGAT CCCGACGTGC TGCTGGTCGA CGACCTGGCG
ATCCGCCGCG GCGCGGGCGC CCTCGGGCTG CCGGATCAGC CCCGGGAGCT GGCCGCCCGC
GGCCTGGACT GGCGGCCTTT CCGCTCCTAC GCCGGCATGC ACCTGTGGGC CGCCTCCGGC
TGA
|
|---|
| Protein sequence | MMTRVSAPLP DPVVVDLPVA GPFAADRLLA FLSRESVPGV EYVREREYAR SLRLGSGDDA
EVGTIRLHLP GPGDPPTVRA VVRFAARIDE AVARCRHLLD LDTDGSAVDR VLRADPGLAA
SVQRCPGLRV PGPAEPAETV VRTILGQQVS VAGARTAATR LVALADDRLP EPVDGLTHLF
PEPARIAALG PTAFVGPRIR AQAVVTAAAA IAGGTLRLDR TDAHARGVLL AMPGIGPWTA
DYLSMRVFGD PDVLLVDDLA IRRGAGALGL PDQPRELAAR GLDWRPFRSY AGMHLWAASG
|
|---|
| |