Gene Namu_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4343 
Symbol 
ID8449969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4830369 
End bp4831208 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID645043390 
ProductABC transporter related 
Protein accessionYP_003203619 
Protein GI258654463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC GCCTGGGCGA ACCGGCCCAC CCGAGCACCT CCCCGGCTCC GGCGGCTCCC 
GGCACCGTCA TCGGCGATCC GGCGTTTGCC GTCGAGGTAC TGGGCGTCCA CAAGTCTTTC
GGTGCGCTGC ACGTCCTGGA TGGGGTCGAC CTGCGGGTCC GGCGCGGTGA GGTCACGGTC
ATCCTCGGTC CGTCCGGGTC CGGCAAGTCC ACCCTGCTCC GGGCGATCAA CCACCTGGAG
AAGGTGGACA AGGGTCTGAT CCTGGTCGAT TCCGAACCGA TCGGCTACCG CCGCAAGGGC
ACCCGGCTGC ACGAGCTGAG CGAGCGGGAG ATCCTGCACC AGCGGGCCAA GGTCGGCTTC
GTCTTTCAGA ACTTCAACCT GTTCCCCCAC CTGACGGTGC TGGAGAACGT GATCGAGGCG
CCCCGCAGCG CCCAGCGCCG CCGGCGGGAC GACGTCGTGG CCCAGGCCCG ATCGTTGCTG
GCCGCGGTCG GCGTCGCCGA CAAGGCCGAC GCCTACCCAC GGCAACTCTC CGGTGGGCAG
CAGCAGCGGG TGGCGATCGC CCGGGCCCTG GCCCTGAACC CCGCGGTCAT CCTGTTCGAC
GAACCCACCT CGGCCCTGGA TCCGGAGCTG GTCGGCGAGG TGCTCGAGGC CATCCGGGCG
CTCGCCGGCC AGGGGCGCAC GCTGATCATC GTCACCCACG AGATCGGTTT CGCCCGTGAG
GTCGCCGACT CGGTGGTGTT CATGGACGCC GGCGTCATCG TCGAGCACGG CACCCCGTCC
CAGGTCCTGG ACCATCCCCG CCACGAACGA ACCCGCGCCT TCCTGTCCAA GGTGCTCTGA
 
Protein sequence
MSLRLGEPAH PSTSPAPAAP GTVIGDPAFA VEVLGVHKSF GALHVLDGVD LRVRRGEVTV 
ILGPSGSGKS TLLRAINHLE KVDKGLILVD SEPIGYRRKG TRLHELSERE ILHQRAKVGF
VFQNFNLFPH LTVLENVIEA PRSAQRRRRD DVVAQARSLL AAVGVADKAD AYPRQLSGGQ
QQRVAIARAL ALNPAVILFD EPTSALDPEL VGEVLEAIRA LAGQGRTLII VTHEIGFARE
VADSVVFMDA GVIVEHGTPS QVLDHPRHER TRAFLSKVL