Gene Namu_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4300 
Symbol 
ID8449926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4782325 
End bp4783113 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID645043348 
Producthypothetical protein 
Protein accessionYP_003203577 
Protein GI258654421 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.336059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAT TCGAGGATCC ACCGGCGCCC ACGCCGGACG GCCAGGAACC GGAGAGGTTC 
AAGGGACCGG TCCGGCTGCG GGGCGACCAG CGATACCAGA CCACCAGCAC CACCGACCAG
CGTCTGCTGG ATTCGCGCGG GCCCAGCGAC TGGGTGCATA CCGACCCCTG GCGGGTCCTG
CGCATCCAGG CGGAGTTCGT CGAGGGGTTC GGCGCGCTGG CCGGGTTGCC CCGGGCGGTG
TCGGTGTTCG GCAGCGCCCG CACCAAACGG GGCACGAAGT ACTACCAGAA GGCCGAGGAG
ATCGGCGCCG CGCTGGCCGA GGAGGGCTTC GCCGTCATCA CCGGCGGCGG CCCCGGGATC
ATGGAGGCCG CGAACAAGGG CGCCAAGAAG GCCGGCGGCC TGTCGGTCGG GCTGGGCATC
GAGCTGCCGT TCGAGCAGGG GCTCAACCGG TATGTCGATC TGGGCATCAA CTTTCGCTAC
TTCTTCGCCC GCAAGACGAT GTTCGTCAAG TACTCGCAGG CCTACATCTG CCTGCCCGGC
GGGTTCGGCA CCCTGGACGA GCTGTTCGAG GCGCTGACCC TGGTGCAGAC CAAGAAGGTC
ACCAAGTTCC CGGTGGTGCT GTTCGGGTCG GAGTACTGGG GCGGCCTGGC CGAGTGGATC
CGCACCTCGG TGGCCGAGGC CGGCAACATC TCACCCCCCG ACCTGAACCT GCTGCACGTC
ACCGACGACG TGGACGACGC CATCCGGGTC GTGCACGACG CCTATGCGGC CTGGGAAGCC
GCCCACTGA
 
Protein sequence
MTEFEDPPAP TPDGQEPERF KGPVRLRGDQ RYQTTSTTDQ RLLDSRGPSD WVHTDPWRVL 
RIQAEFVEGF GALAGLPRAV SVFGSARTKR GTKYYQKAEE IGAALAEEGF AVITGGGPGI
MEAANKGAKK AGGLSVGLGI ELPFEQGLNR YVDLGINFRY FFARKTMFVK YSQAYICLPG
GFGTLDELFE ALTLVQTKKV TKFPVVLFGS EYWGGLAEWI RTSVAEAGNI SPPDLNLLHV
TDDVDDAIRV VHDAYAAWEA AH