Gene Namu_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4292 
Symbol 
ID8449918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4774782 
End bp4775426 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content75% 
IMG OID645043340 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_003203569 
Protein GI258654413 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.839237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC TCACCGAGCC GGCGGCCACC CGGCCGTCGC TGCTGACCCG GTGCCCGGTG 
GTGCCGGTCG TCGTGCTGGA CACCGCCGAC CAGGCCCGCC CGCTGGCCGC GGCGCTGCTG
GCCGGCGGCA TCGACGTCAT CGAGGTGACG CTGCGCACCC CGGCCGGGCT GGCCGGCATC
ACGGCGATCG CCGACCTCCC CGGCCTGCAC GTCGGCGCCG GATCGGTCCT CACGGCCACC
CAGGTGGATC AGGTCGTGGA CGCCGGCGCC CGGTTCGTGG TCAGCCCGGG CCTGTCCGCG
GCCGTCGTCG AGCGGGCCCA TGAGCGGGGC GTGCCCGCGC TGCCCGGGAT CGCCACCGCC
TCGGACCTGA TGGCCGCGGT CGCTCTCGGC CTGGACGAGG TCAAGATCTT CCCGGCCGGG
TTGCTGGGCG GCCCGGCCAT GATCACGGCG CTGGCCGCCC CGTTCCCGCA GCTGCGGTTC
ATGCCCTCGG GCGGAGTGTC GGCGGCCACG ATGACCGATT ACCTGTCCCT GCCGATGGTG
CCGGCGGTCA GCGGCAGCTG GATGGTCGAT CGGGAACTGC TGCGCCGCAA CCGGTTCGAC
GAGGTCACCC GGCTGTCGGC GGCCGCGATC AGCCAGGCTC GGTGA
 
Protein sequence
MSTLTEPAAT RPSLLTRCPV VPVVVLDTAD QARPLAAALL AGGIDVIEVT LRTPAGLAGI 
TAIADLPGLH VGAGSVLTAT QVDQVVDAGA RFVVSPGLSA AVVERAHERG VPALPGIATA
SDLMAAVALG LDEVKIFPAG LLGGPAMITA LAAPFPQLRF MPSGGVSAAT MTDYLSLPMV
PAVSGSWMVD RELLRRNRFD EVTRLSAAAI SQAR