Gene Namu_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4285 
Symbol 
ID8449911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4766339 
End bp4767355 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID645043333 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003203562 
Protein GI258654406 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.171981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.523747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA CCCTCACCGA TGTGGCGAAG CGGGCCGGCG TGGCCCTGTC CACCGCGTCC 
CGCGCCTTTT CCGACCCCGA TCGGCTCGGG CCGGCAACGT TGCGCAAGAT TCTGGCCGTC
GCCCAGGACC TCGGTTACCA GGCCCCGGCC GCCCGGCTGG TCGACCCCGC CACCGACGAC
GACACCACCA CCGTGGCCGT GGTCGTGCCC GACATCGGCA ACCCGGTGTT CGCCGCGTTC
GTCAAGGCGG CCCAGTCGCA GGGCTGGTTC CGCCGGCAGA CCGTCGTGCT GGCCGACACC
GACCTGAACC CCGACCGCGA GCGGGACGTG CTCAGCCACC TGCGGGACAA GGTCGACGGC
ATCATCATCA GCTCGCCGCG GCTGGAGGCC GAGCAGATCC TGGCCCTGTG CCCGCGCATC
CCGGTGGTGC TGGTGAACCG GCAGACCCCG GGCACCGACT GCGTCATCGC CGATGCGACC
GACGGCCTGC GGCAGACCAT CGACTACCTG CGCGCACTGG GCCACCACCG CATCGCCTAC
GTGCAGGGCT CGCCACAGTC CTGGTCCAAC GACCATCGCG TCACCCTGGT CCGCGAGTTG
ACCGCCGAGG CCGGGATGGA CCTGCAGGTC CTGGGCTGGC AGGCGGAGAC CGTGGCCGGC
GGCACGGCCG CCGCGGCCAG CGTGGTGGCC ACCGGAGCCT CCGCCGTCAT CACCCACAAC
GACCTGATGG CCCTGGGCGT GATGGCCGGC GCCCGCGCCC TGGGCGTGCG GGTGCCGGAG
GACCTGAGCG TGGTGGGCAT CGACGACATC CCGGTGGCCG CGATCACCCA CCCCAGCCTG
ACCAGCGTGT CGGTGCCGAT GGCCCGCATG GGGGTGGCGG CGATGGAATC GCTCGAGCGC
AATCTCGTCG AGCGGCAGAC CCCGCGCCTG GTGCGGATGC CCACCCAGCT CGTCGTCCGC
CAGTCCACCG GTCCGGCCGC CACCGCCGCG GCCACCAGCA CGGGAGCCTC CGCATGA
 
Protein sequence
MAATLTDVAK RAGVALSTAS RAFSDPDRLG PATLRKILAV AQDLGYQAPA ARLVDPATDD 
DTTTVAVVVP DIGNPVFAAF VKAAQSQGWF RRQTVVLADT DLNPDRERDV LSHLRDKVDG
IIISSPRLEA EQILALCPRI PVVLVNRQTP GTDCVIADAT DGLRQTIDYL RALGHHRIAY
VQGSPQSWSN DHRVTLVREL TAEAGMDLQV LGWQAETVAG GTAAAASVVA TGASAVITHN
DLMALGVMAG ARALGVRVPE DLSVVGIDDI PVAAITHPSL TSVSVPMARM GVAAMESLER
NLVERQTPRL VRMPTQLVVR QSTGPAATAA ATSTGASA