| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4278 |
|---|
| Symbol | pyrC |
|---|
| ID | 8449904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4760110 |
|---|
| End bp | 4761417 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645043326 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_003203555 |
|---|
| Protein GI | 258654399 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.253817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGT TGATCACCGG TGGGGCCCCG TACGGGGAAC AGCCCGCCGA CATCCTGGTG
GTGGACGGGG TGATCGCCGC CGTCGGGGCC GACGCCGCCG CCGACCCGCG GGCCCGGGAC
GCCGAGGTGG TGGACGCGGC CGGGCTGGTC GTGCTGCCCG GCCTGGTCGA CCTGCACACC
CACCTGCGCG AGCCGGGCCG GGAGGACGCC GAGACGGTGG CCACCGGGTC GGCCGCGGCC
GCGCTCGGCG GCTACACCGC GGTGTTCGCC ATGCCCAACA CCGACCCGAC CGCGGACACC
GCCGGGGTCG TCGAGCAGGT GCTGCGGCTC GGCGAGCAGA CCGGACTGGT CGACGTGCAC
CCGATCGGCG CGGTCACCGT CGGCCGCAAG GGCCAGAAGC TGGCCGAGCT GGCCGCGATG
GCCACCTCGG CGGCGCGGGT GCGGGTGTTC TCCGACGACG GTGACTGCGT CTCCGACCCG
CTGCTGATGC GCCGGGCCCT GGAGTACGTC AAGGCGTTCG GCGGGGTGAT CGCCCAGCAC
GCGCAGGAAC CGCGTCTGAC CCAGGGCGCG CAGATGCACG AGGGGGAGGT GTCCGCCCGG
CTCGGTCTGA CCGGCTGGCC GGCGGTGGCC GAAGAGGCGA TCATCGCCCG CGACTGCCTG
CTCACCGACC ACGTCGGCTC CCGGCTGCAC GTGTGCCACC TGTCCACCGC GGGCAGTGTG
GAGGTGGTGG CCGCGGCCAA GAAGCGCGGC ACGAACGTCA CCGCCGAGGT GACCCCGCAC
CACCTGCTGC TCACCGACGA GCGGGCGCAG GGCTACGACC CGGTGTTCAA GGTGAACCCG
CCGCTGCGGA CCGAGGCCGA CGTGCGCGCT CTGCGGACGG GGCTGGCCAC CGGCGTGATC
GACATCGTGG CCACCGACCA CGCCCCGCAC GCCAGCCAGG ACAAGGAAAC CGAGTGGGAC
AACGCCAGTC CCGGCATGCT CGGGCTGCAG ACCGCGCTCT CGGTGGTCAT CGCCACGATG
GTCCGCACCG GCCTGCTGGA CTGGCGCGGG GTGGCCCGGG TGATGGCCGA GGCGCCGGCC
CGGATCGGCG GCCTGACCGA CCAGGGCCGG CCGATCGCCG CCGGCGAGCC GGCCAACCTG
GTGCTCCTGG ACCCGCAGGC GAGCTGGACG GTGCGCGGCG CGGACTTCGC CTCGCTGTCC
CGCAACACCC CCTTCGAGGG GATGGAGCTG CCCGGCCGGG TCGTCGCCAC CTACCTGCGG
GGCCGGCGGA CCGCGTCGGC CGGCGTGGCC CTGGGAGCGG AGAGCTGA
|
|---|
| Protein sequence | MSVLITGGAP YGEQPADILV VDGVIAAVGA DAAADPRARD AEVVDAAGLV VLPGLVDLHT
HLREPGREDA ETVATGSAAA ALGGYTAVFA MPNTDPTADT AGVVEQVLRL GEQTGLVDVH
PIGAVTVGRK GQKLAELAAM ATSAARVRVF SDDGDCVSDP LLMRRALEYV KAFGGVIAQH
AQEPRLTQGA QMHEGEVSAR LGLTGWPAVA EEAIIARDCL LTDHVGSRLH VCHLSTAGSV
EVVAAAKKRG TNVTAEVTPH HLLLTDERAQ GYDPVFKVNP PLRTEADVRA LRTGLATGVI
DIVATDHAPH ASQDKETEWD NASPGMLGLQ TALSVVIATM VRTGLLDWRG VARVMAEAPA
RIGGLTDQGR PIAAGEPANL VLLDPQASWT VRGADFASLS RNTPFEGMEL PGRVVATYLR
GRRTASAGVA LGAES
|
|---|
| |