Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4270 |
Symbol | |
ID | 8449896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4749856 |
End bp | 4750821 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645043318 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003203547 |
Protein GI | 258654391 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0190021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCCC GCCGATTGCT GTTCCTGTCC GAGCTGGCCC GGCTCGGATC CATGCAGCGG GTGGCCGACG AGCTGGACGT GACGACCTCC ACCGTCTCCC AGCAGATCGC GGCGCTCGGC CGGGAGCTGC GGGTACGCCT GATCGAACCG GACGGCCGCC GGGTGCGCCT GACCCCGGCC GGGCGCCGGC TGGCCGAACA CGCCGCCACC ATCCTGGCCG GGATCGACGC CGCCCGGCGC GATCTCGGCT CGGACGAGCC CGGGGGCACG GTCACCGTGG CCGGCTTCGC CACCGGCATC CGGCAGGCAT TGATCCCGGT GATCCGCCGG CTGGCCGCCG ACCGGCCGCG AATCACCCTG CACGTCCACG AACACGAGCC ACCGGAGGCG ATGGCCGCGC TGGCCGCCGG CGCGATCGAT CTGGCCCTGG TCTACGACTA CTCGCTGGCC CCGCTGCGGG TCGAACCGAG CGTCGAGGTG ACCCGGCTCT GGACGGCCGC CTGGGCACTG GGCGTCCCGG CGGCGGCCGG GCCGCAAGCG ATCGAGCCGG TGCCCGAACC GGCTGCGGCG GCGGACTCCC CCGCCACGCT CCGGCAATTC CGGGACCATC AGTGGATCGT CAACTCCCGC AACACCGCCG ACGAGGACGC GCTGCGCATC ATCGCCTCGA TGGCCGACTT CGAACCCGAG ATCGCCCACC GGGCCGACAG TCTGGACCTG GTCCAGGACC TGATCACGGC CGGCCACGGG GTCGGGCTGC TGCCGGCGGA CGGCGCCGTC GCGCCCGGCA TCCGACTGCT GCCGCTGACC AACCCGCCGG CGCTGCTGCG CGCGTTCGCG GTCACCCGGC GCGGGCACAC GCAATGGGCG CCGTTGGCCC TGGTGCGCCG GATGCTCGTC GAGCACGCCT CGCGCATGAC GGAGGGCAAG ACAGCGGTCA GGACAGCGGG CCCGACAGCG GGCTGA
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Protein sequence | MDPRRLLFLS ELARLGSMQR VADELDVTTS TVSQQIAALG RELRVRLIEP DGRRVRLTPA GRRLAEHAAT ILAGIDAARR DLGSDEPGGT VTVAGFATGI RQALIPVIRR LAADRPRITL HVHEHEPPEA MAALAAGAID LALVYDYSLA PLRVEPSVEV TRLWTAAWAL GVPAAAGPQA IEPVPEPAAA ADSPATLRQF RDHQWIVNSR NTADEDALRI IASMADFEPE IAHRADSLDL VQDLITAGHG VGLLPADGAV APGIRLLPLT NPPALLRAFA VTRRGHTQWA PLALVRRMLV EHASRMTEGK TAVRTAGPTA G
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