| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4266 |
|---|
| Symbol | |
|---|
| ID | 8449892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4745003 |
|---|
| End bp | 4745956 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645043314 |
|---|
| Product | pyruvate carboxyltransferase |
|---|
| Protein accession | YP_003203543 |
|---|
| Protein GI | 258654387 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0273285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAGC TGCCCAGCCA CGTCGACATC CGCGAGGTCG GACCGCGCGA CGGCCTGCAG
ATCGAGGCCC CGATCAGCAC CGCGGGCAAG ATCCGGCTGC TGCAGGCGCT GGTCGCCACC
GGGGTACGGC GGATCGAGGC GACCGCCTTC GTCTCACCGC GGGCCGTCCC GGCCATGGCC
GACGCCGAGC GGATCGCCGA GTACGTCGGC ACCGTCCCCG GCGTCGACTG GTCCGGCCTG
GTCGCCTCCC CGAACGGGGC GACGCGGGCG ATCGGCAGCG GGCTGCGCAC GATCGAGTAC
GTGGTGTCCG CGGCCGACGG GCACAGTTGG GCCAACGCCC GGCGCTCCAC ACAGGACGCG
GTGGACGCGG TCGCCGAGGT GGCCCGGATC GTGCACGACG CCGGGGGCCG GCTGGAGGTG
ATCATCGCGA CCGCCTGGGA CTGCCCGTTC GACGGGCCGA CCGACCCGCA GCGCACCGCG
GGCATCGCCG CGCGGGCCCT GGAGCTGGGC GCCGACCAGC TGTGCTTCGG CGACACCATC
GGCACCGCCA CTCCGGCGCG GGTGCGGCGG TTGCTCGACG CCGTCCGGGC GGCCATCGGT
GGCCCGGGTG ACGGGGGCGC CGACCCGGTG GCGCTGGGCG CCCATTTCCA CAACACCCGG
GGCACCGGCA TCGCCAGCGC GTTCGCCGCG GTGCAGGCCG GGATCAGGCA GCTCGACGCC
TCGGTCGGCG GGCTGGGCGG CTGCCCGTTC GCGCCCGGGG CCAGCGGCAA CATCGCCACC
GAAGAGCTGG TGTACCTGCT CGACGACGCG GGCATCAGCA CCGGGGTGGA CCTGGACGCG
GTGCTGGCCG CCGCCGCGGT GGCCCGGGAG CTGGTCGGAC ATCCGTTGGA GAGCAACCTG
TTCCGGGCCG GCGGGCGCAA CCGGCCGCGG CCGGCGCCGG CCGACGATCG CTGA
|
|---|
| Protein sequence | MTQLPSHVDI REVGPRDGLQ IEAPISTAGK IRLLQALVAT GVRRIEATAF VSPRAVPAMA
DAERIAEYVG TVPGVDWSGL VASPNGATRA IGSGLRTIEY VVSAADGHSW ANARRSTQDA
VDAVAEVARI VHDAGGRLEV IIATAWDCPF DGPTDPQRTA GIAARALELG ADQLCFGDTI
GTATPARVRR LLDAVRAAIG GPGDGGADPV ALGAHFHNTR GTGIASAFAA VQAGIRQLDA
SVGGLGGCPF APGASGNIAT EELVYLLDDA GISTGVDLDA VLAAAAVARE LVGHPLESNL
FRAGGRNRPR PAPADDR
|
|---|
| |