Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4262 |
Symbol | |
ID | 8449888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4735754 |
End bp | 4738234 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645043311 |
Product | Radical SAM domain protein |
Protein accession | YP_003203540 |
Protein GI | 258654384 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.296294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGTCT GGTCGACCCA CTCGTCCGCT GCACTCGGCT CAGCTGCCCT CGACTCGGTC GGGCTCACCG GGGTGGCCGC GCGGGCGCTG GCCACCCTGC CCACGGATCA GCTGACCGCC CGCGCGCGCG AGATCCGGGA CGCGTCGTTC GGCACCCGGA TCACGTTCTC GCCCAAGGTG TTCCTGCCGC TGACCAGGCT GTGCGCGGAT CGCTGCGGGT ACTGCACGTT CGCCACCGCG CCGCGCCACC TGCCGCACGC CTACCTCACC CCGGACGAGG TGCTGGCCGT CGCCGGGCAG GGTGCCACCC ACGGCTGCGC CGAGGCCCTG TTCACCCTGG GGGAGGGGCC CGAGCGCCGG TACCCGCAGG CCCGGGAGTG GCTCGACGAG CACGGCTACA CCTCGACGGT GGACTACCTG GTGGCGATGG CCGGCCGGGT GCTGGGCGAG ACCGGCCTGT TGCCGCACGC CAACGCCGGC GCCATCTCGG CGCCGGAGCT GGCTCGGCTG CGGACGGTCG CCCCCAGCCA GGGGATGATG ATCGAATCGC TGCGGCCCGA CCTGGCCGCC CACCGCGGCG CTCCGGACAA GACCCCGGAA CGTCGGCTGG CCACCCTGCG GGCCGCCGGC GAGCTGGCCA TCCCGTTCAC CACCGGCATC CTGGTCGGCA TCGGGGAGAC CGAGGCCGAC CGGATCGAGG CCCTGCTGGC CATCGCCGAC GTGCATCGCG AGTTCGGGCA CATCCAGGAA GTGATCGTGC AGAACTTCCT GCCCAAACCG GGCACGGCGA TGCGGGACGA GCCGCCGTGC CCGCCGCTGG AGCACCTGCG GGCGATCGCG CTGGCCCGGC TGATCCTGCC GCCGGATGTG CATCTGCAGG CCCCGCCGAA CCTGACCGAC ACCGAGCAGC TGGGCGAGCT GCTGGCCGCC GGCCTCGACG ACTGGGGCGG GGTGTCCCCG GTGACCGCCG ACCACGTCAA TCCCGAACGC CCGTGGCCGG CCCTGCACAC CCTGCGGTCG GCGACCGAGG ACGCCGGCCA CACGCTGGCC CCGCGGATGA CGATCTACCC GGAGTTCGCG CTCGATCCGC AACGGTGGCT GGACCCGGCG ACCCGGTTCC CGGTGCTCGA CCGGTCCGAC GCGCAGGGCC TGGGCCGGGA CGACCCGGGC GCGGTGTGGC CGGAGAAGCA CGGCGCCGCG GCCAACGTCG GCACCGGTGC CGAGGTGATT CAGATCGGCC GCCGGTCCAC CGCCTGGTAC TCGGGGGCGG ACGTGGCGCC GCCGGTGCTG ATCCCGGGGC CGGCGTTCGC CCGCGGCCGG GTCGCCGAGG TGCTCGACGG GGCCCGGGCC GGGCAGGAGC TGGGCGAGGC CGAGATCGTC GCCCTGTTCG GGGCCCGGGG CCCGGAGGTC GCCGCGGTCG CCGAGCTGGC CGACGAGCTG CGCCGCGAGC TGGTCGGCGA CGAGGTCACC TACGTGATCA ACCGGAACAT CAACTACACC AACGTGTGCA CGTTCCGGTG CACGTTCTGC GGGTTCTCCA AGGGGCCGCT CTCGCTCAAC CTGCGGGGCA AGCCGTACCT GCTCTCGCTG GAGGACATCG CGCAGCGCTC CCGGGAGGCG GTCGACCTCG GGGCCACCGA GGTCTGCCTG CAGGGCGGCA TCCACCCGCA CTTCGACGGC AACTTCTACG TCGACGTCGC CCAGGCAGTG CACGACGCGG TGCCCGACCT GCACATCCAC GGCTTCACCG CGCTGGAGGT GCACGAGGGG GCCAAGCGGC TGGGCGAGCC GCTGACCGAC TACCTGCGCC GGCTGCAGGC CGCCGGCCTG AAAACCCTGC CGGGCACCGC CGCGGAGATC CTGGACGACG AGATCCGGCG GGTCATCTGC CCGGACAAGA TCACCACCGA CGAGTGGCTC GAGGTGCACC GGGCCGCGCA CTCGGTCGGC CTGCGCAGCA ACGTCACCAT CATGTTCGGC TCGGTCGAGC AGCCGCAGCA CTGGGCCCGG CACCTGCTGC GGACCCGGGC GCTGCAGCGG GAGACCGGCG GGTTCACCGA GTTCGTGCCG CTGCCGTTCG TGCACATGGC CGCCCCGATC TACCTCAAGC GGGGGGCCCG GCGCGGGCCG ACCTGGCGCG AGGCGGTCCT GATGCACGCG GTCGGCCGCA TCGTCTACGC CGGCACCATC GACAACATCC AGGCGTCCTG GGTCAAGCAG GGTCCGATCG GCGCCCGCCA GTTGCTGCGG GCCGGCGTGA ACGACCTGGG CGGCACGCTG ATGGAGGAGA ACATCTCCCG GGCCGCCGGG GCCAGCCACG GCCAGGGCCT GGACGCCGCC GGGCTGCGCG CGCTGGCCGC GGCCGAGGGC CGGCCGGCCG TGCAACGGAC CACCTTGTAC GGGCGCGTCC CCGCCGGCCT GGCCACTGCC GCCGGATCGG TGACCGCCGC GCCGCAGGAC TCGGCGCCGG TCTCGGCCTG A
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Protein sequence | MTVWSTHSSA ALGSAALDSV GLTGVAARAL ATLPTDQLTA RAREIRDASF GTRITFSPKV FLPLTRLCAD RCGYCTFATA PRHLPHAYLT PDEVLAVAGQ GATHGCAEAL FTLGEGPERR YPQAREWLDE HGYTSTVDYL VAMAGRVLGE TGLLPHANAG AISAPELARL RTVAPSQGMM IESLRPDLAA HRGAPDKTPE RRLATLRAAG ELAIPFTTGI LVGIGETEAD RIEALLAIAD VHREFGHIQE VIVQNFLPKP GTAMRDEPPC PPLEHLRAIA LARLILPPDV HLQAPPNLTD TEQLGELLAA GLDDWGGVSP VTADHVNPER PWPALHTLRS ATEDAGHTLA PRMTIYPEFA LDPQRWLDPA TRFPVLDRSD AQGLGRDDPG AVWPEKHGAA ANVGTGAEVI QIGRRSTAWY SGADVAPPVL IPGPAFARGR VAEVLDGARA GQELGEAEIV ALFGARGPEV AAVAELADEL RRELVGDEVT YVINRNINYT NVCTFRCTFC GFSKGPLSLN LRGKPYLLSL EDIAQRSREA VDLGATEVCL QGGIHPHFDG NFYVDVAQAV HDAVPDLHIH GFTALEVHEG AKRLGEPLTD YLRRLQAAGL KTLPGTAAEI LDDEIRRVIC PDKITTDEWL EVHRAAHSVG LRSNVTIMFG SVEQPQHWAR HLLRTRALQR ETGGFTEFVP LPFVHMAAPI YLKRGARRGP TWREAVLMHA VGRIVYAGTI DNIQASWVKQ GPIGARQLLR AGVNDLGGTL MEENISRAAG ASHGQGLDAA GLRALAAAEG RPAVQRTTLY GRVPAGLATA AGSVTAAPQD SAPVSA
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