Gene Namu_4261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4261 
Symbol 
ID8449887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4734302 
End bp4735585 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content74% 
IMG OID645043310 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003203539 
Protein GI258654383 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.426527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CGAGTGCTCC GGCCGTCGCC GGGGCCGCCC CCGCACTGAC CCGCCAGCAG 
GTGGTCGCCT GGCGCAACGC GCTGTTCGTG ATCTTCGCGC TGTGCGGGGT CGCGCTGGCC
AGCTGGGTCG CCCGTACCCC GGCGATCCGG GATGCCGTCG GCGCCTCGAC CTGGCAGATG
GGCCTGATCG TCTTCGGGCT GGCCGGCGGG TCCATGGTCG GCCTGGTCCT GTCCAGCCAC
ATCCTGGCCC GGTTCGGGCC GATCGCCACC ATCCGGGCCA CCATGATCGT GTCCGCGGTC
GGCATCGTCA TCGCCGGCAT CGGCGGCAGC CTGGCCTCCA TTCCGGTGGT CACCGCCGGC
CTGGTCGTCT TCGGGCTCGG CACCAGCACC TGCGACGTGT CGATGAACGT CGACGGCGCG
GCCAACGAGC GGGCGCTGGG CCGCACCGTC ATGCCCATCT ACCACGCCAT GTTCAGCGCC
GGCACCATCG TCGGCGCGGC CGGCGGCGCG CTGGCCGAGC ACCTCGGCGT GCCCGTCGTC
GCGCACCTGT CGGTGGTCGC CGGGCTGATG ATCGGCGCGG TGCTGGTGGC CGTGCGCTTC
CTGCAGCCCG ACCCGGCCCT GTCCGCCGCG CAGGAGACCG ACCAGGCCCA GGAGAAGGGG
GACTGGCGGT CCCGGCTGAC CGTGTGGCGC GACCGCCGCA CCCTGCTGAT CGGGCTGATC
GTGCTGGGCA TGGCCTTCGC CGAGGGGTCG GCCAACGACT GGCTGGCCCT GGCCATGGTC
GACGGCCACG GCGTGGACAA CGCCACCGGC GCCCTGGTGT TCGGCATCTT CGTCACCGCG
ATGACCATCG GCCGGGTCGG CGGCGTGCTG GTGCTCGACC GGTTCGGTCG GGTGCCGGTG
CTGCGGGTCT CGGCCGTGCT GGCCGGCGTC GGCCTGGCCA CCATGATCTT CGCGCCCAAT
CCCTGGTTGG CCGCCGCGGG CGTCGTCTCC TGGGGCCTGG GTTCCGCGCT CGGCTTCCCG
GTCGGCATGT CCGCGGCCGC CGACGACCCG AAGACGGCCG CCGCCCGGGT CAGCGCCGTG
GCCACCATCG GTTACCTGGC CTTCCTGGTC GGGCCCCCGC TGGTCGGTTT CGTCGGCCAG
CAGGTCGGAC TGCTCAACGC CCTGCTGATC GTGCTCGCCC TGATCGCGGT CGCCGGCATC
GTCTCGCCGG CCGCCCGGGA GCCGCGGCGA CCGGCCGCGG TGCTCGCCCG GTCCGAGAAG
GGCGCCGACC GCCCCGCGAC CTGA
 
Protein sequence
MSDPSAPAVA GAAPALTRQQ VVAWRNALFV IFALCGVALA SWVARTPAIR DAVGASTWQM 
GLIVFGLAGG SMVGLVLSSH ILARFGPIAT IRATMIVSAV GIVIAGIGGS LASIPVVTAG
LVVFGLGTST CDVSMNVDGA ANERALGRTV MPIYHAMFSA GTIVGAAGGA LAEHLGVPVV
AHLSVVAGLM IGAVLVAVRF LQPDPALSAA QETDQAQEKG DWRSRLTVWR DRRTLLIGLI
VLGMAFAEGS ANDWLALAMV DGHGVDNATG ALVFGIFVTA MTIGRVGGVL VLDRFGRVPV
LRVSAVLAGV GLATMIFAPN PWLAAAGVVS WGLGSALGFP VGMSAAADDP KTAAARVSAV
ATIGYLAFLV GPPLVGFVGQ QVGLLNALLI VLALIAVAGI VSPAAREPRR PAAVLARSEK
GADRPAT