| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4257 |
|---|
| Symbol | |
|---|
| ID | 8449883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4731391 |
|---|
| End bp | 4732887 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645043306 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_003203535 |
|---|
| Protein GI | 258654379 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.892606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCACCA CCACCAGCAC ACTGTCCGAC CTGAACCTGG TCGCCGACCG ATCCGGTGAC
CTGGACTACA AGGTCGCCTC GATGGCCCTG GCCGATTTCG GCCGCAAGGA AATCACCCTG
GCCGAGCACG AGATGCCCGG TCTGATGGCC CTGCGTCGCG AATACGCCGA GGTCCAGCCG
CTGGCCGGGG CCCGGATCTC CGGCTCGCTG CACATGACCG TGCAGACCGC CGTGCTCATC
GAGACCCTGG TCGAGCTCGG CGCCGACGTC CGCTGGGCGT CCTGCAACAT CTTCTCCACC
CAGGACCACG CCGCGGCCGC CGTCGTCGTC GGCAAGTACG GCACCGTCGA GGAGCCCAAG
GGCACCCCGG TCTTCGCCTG GAAGGGCGAG ACCCTGCCGG AGTACTGGTG GTGCACGGAG
CAGATGCTGC GCTGGCCGGA CGGTCAGGGC CCGAACATGA TCCTGGACGA CGGCGGCGAC
GCCACCCTGC TGGTGCACAA GGGGGTCGCC TACGAGAAGA CCGGGGTGAT CCCGTCGATC
AACGAGGACG ACCCGGAGTA CTCCGAGGAG TACGCGGTCA TCCTGGACTT CCTGCGCGCC
TCGCTGGCCG CCGACCCGCA GTACTGGACG CGGACCGCGC CGTCGATCAT CGGCGTCACC
GAGGAGACCA CCACCGGGGT CAACCGGCTC TACCAGCTGG CCGCGGCCGG CGAGCTGCTG
TTCCCGGCGA TCAACGTCAA CGACTCGGTC ACCAAGAGCA AGTTCGACAA CAAGTACGGC
ATCCGGCACT CGCTGATCGA CGGCATCAAC CGCGGCACCG ACGTGCTGAT CGGCGGCAAG
GTCGCGCTGG TCGCAGGCTA CGGCGACGTC GGCAAGGGGG CGGCCGAGTC CCTGCGCGGC
CAGGGCGCGC GGGTCGTCGT CGCCGAGATC GACCCGATCT GCGCGCTGCA GGCGCTGATG
GACGGTTTCG AGGTCTCCAC CGTCGACAAG GCCGTCGAGC GGGCCGACCT GATCATCACC
ACCACCGGCA ACAAGGACAT CATCACCGTC GCGCACATGA GCCGGATGAA GCACCAGGCG
ATCCTGGGCA ACATCGGGCA CTTCGACAAC GAGATCGACA TGGCCGGGCT GGCCCGGTCC
GGGGCCTCGA AGATCGAGAT CAAGCCGCAG GTCGACGAGT GGCGCTTCGC CGACGGTCAC
ACGATCATCG TGCTGTCGGC CGGCCGGCTG CTGAACCTGG GCAACGCCAC CGGGCACCCC
TCGTTCGTGA TGAGCACCTC GTTCTCCAAC CAGGTCATCG CCCAGCTGGA GCTGTTCACC
AAGCCGAACG AGTGGGACAA GGAGGTCTAC CGCCTGCCCA AGCACCTGGA CGAGAAGGTC
GCCAAGATCC ACGTCGAGGC GCTCGGCGGC GAGCTGACCA AGCTGTCCAA GGACCAGGCC
GAGTACCTCG GCGTGGATGT CGAGGGGCCG TTCAAGCCGG AGCACTACCG GTACTGA
|
|---|
| Protein sequence | MSTTTSTLSD LNLVADRSGD LDYKVASMAL ADFGRKEITL AEHEMPGLMA LRREYAEVQP
LAGARISGSL HMTVQTAVLI ETLVELGADV RWASCNIFST QDHAAAAVVV GKYGTVEEPK
GTPVFAWKGE TLPEYWWCTE QMLRWPDGQG PNMILDDGGD ATLLVHKGVA YEKTGVIPSI
NEDDPEYSEE YAVILDFLRA SLAADPQYWT RTAPSIIGVT EETTTGVNRL YQLAAAGELL
FPAINVNDSV TKSKFDNKYG IRHSLIDGIN RGTDVLIGGK VALVAGYGDV GKGAAESLRG
QGARVVVAEI DPICALQALM DGFEVSTVDK AVERADLIIT TTGNKDIITV AHMSRMKHQA
ILGNIGHFDN EIDMAGLARS GASKIEIKPQ VDEWRFADGH TIIVLSAGRL LNLGNATGHP
SFVMSTSFSN QVIAQLELFT KPNEWDKEVY RLPKHLDEKV AKIHVEALGG ELTKLSKDQA
EYLGVDVEGP FKPEHYRY
|
|---|
| |