| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4245 |
|---|
| Symbol | |
|---|
| ID | 8449871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4720097 |
|---|
| End bp | 4720600 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645043294 |
|---|
| Product | protein of unknown function DUF1707 |
|---|
| Protein accession | YP_003203523 |
|---|
| Protein GI | 258654367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.00888226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGGT TCGGCGGCGG CCCGGTCGCC GGTGCGCCTA GAGTCGACGA CGTGAGCGCG
CCATCATCGG GACCCGATCC GTCGCAGATC CGGATCGGCG ACGCCGAACG CAACTCGGCC
CTGGACGCGC TCAGCGAGCA CCTGGGCAAG GGCCGGATCG ACCTGGACGA GTTCGGCACC
CGCAGCGCGC AGGTCACCCA GGCCCGCACG GTGGCCGACC TGCGGGCGCT GTTCACCGAC
CTGCCGCTGC CGCACCCCAC CCTGCCGGGT CCGGCCACGG TGAGCGCGCC GCCGCCGGCG
ATGCGTCCGG CCGCGTCCCC GGCCCGGCCG GACGATGCGC GGACGCCGGC GCAACGCGGC
GCGGCGGTGC TGCTGGCCGC CTCCGGCATC CTGAGCCTGG TGCTGTTCTT CGTCACCAAG
ACCTGGCTGG TGTTCCTGAT CCCGGCGCTG ATCGCCGTCG TGACCAGCGC CATGTGGGGC
GGCGACTGGC GCAACCGGAG CTGA
|
|---|
| Protein sequence | MIGFGGGPVA GAPRVDDVSA PSSGPDPSQI RIGDAERNSA LDALSEHLGK GRIDLDEFGT
RSAQVTQART VADLRALFTD LPLPHPTLPG PATVSAPPPA MRPAASPARP DDARTPAQRG
AAVLLAASGI LSLVLFFVTK TWLVFLIPAL IAVVTSAMWG GDWRNRS
|
|---|
| |